Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq291 100 3e-16 >seq291 Length=50391 Score = 100 bits (110), Expect = 3e-16 Identities = 417/653 (64%), Gaps = 4/653 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||||| |||||||| || ||| || ||||| |||||||| || ||| Sbjct 27039 AAGTACAACTTCTTTGGTTTCAAAACCCTCGAGCGTTCTTACCTTCTCAAGATTGACGGC 27098 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || | || || || || || || | ||||| || || ||||| || || || | Sbjct 27099 AAGATTGCTGAACGTCCTCAACATTTGATCATGCGTGTTGCAATCGGTATCCATGGAACC 27158 Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGC 93893 || || | | | | ||| | | | || ||| || || | || || Sbjct 27159 GATATTGATGCAGCTATTGAGA-CATACAACTTGATGTCCGAAAAATACTTCACACACGC 27217 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | || || || || || || || || || || || |||||||| |||||| || | Sbjct 27218 TAGTCCTACTCTATTTAATGCAGGCACACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCT 27277 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 || | |||| || || ||| || || | || | ||||| |||||| || Sbjct 27278 CACCATGAAGGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAAT 27337 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || || || | | | ||| || | ||||| || || || || Sbjct 27338 CTCCAAGACAGCAGGCGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCATA 27397 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||| ||||| || ||||||||| | | || |||||||| || |||||||| Sbjct 27398 CATTGCCGGCACCAACGGTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACAA 27457 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 |||| || || || || || || ||| | | | ||| | ||||| | || | Sbjct 27458 TACGGCTCGTTATGTCGATCAAGGCGGTAATAAGCGTCCGGGCGCATTCGCAATGTACTT 27517 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 || |||||||| || ||| | | || | ||| ||||||| ||| || || || Sbjct 27518 GGAACCCTGGCATGCAGACATTTTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAGA 27577 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || || | || || ||||| ||||||||||| || || ||||| ||| | || Sbjct 27578 CGAAATCAGAGCTCGTGATCTGTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGCG 27637 Query 94314 CGTCGAGAAAAACT-CCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGA 94365 ||| ||| | | | ||| ||| ||||| ||||||||| ||| ||| Sbjct 27638 TGTC-AGAGACGGTGGTGATTGGTCTCTATTTTGCCCCAATGAAGCTCCTGGA 27689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494713590001840