Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq243 131 2e-25 seq769 125 7e-24 seq71 125 7e-24 seq80 120 3e-22 seq815 114 1e-20 seq291 114 1e-20 seq439 107 2e-18 seq175 107 2e-18 seq686 104 2e-17 seq862 87.8 2e-12 seq83 82.4 8e-11 >seq243 Length=56764 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | | || |||||||| ||||| |||||||| Sbjct 37851 CCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTT 37910 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || |||||||||||||| | | |||| ||||| ||||| || ||||| Sbjct 37911 AGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 37970 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||||||||||||| |||| || | ||||| | ||||| || Sbjct 37971 ATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTG-TCGATAGTGTCAGAAGACTCGAC 38029 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | | | || ||||| || || || ||||| || |||||| Sbjct 38030 TTCTAAAGTAATCATCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATG 38078 >seq769 Length=21522 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||| |||||||| | ||||| || |||||||||||||| | | Sbjct 14262 GATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTGTTTACCAGCA 14203 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| ||||| || ||||| |||||||| ||||| || |||||||||| | Sbjct 14202 AAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACA 14143 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | || || || || | || | || || ||||| || || || Sbjct 14142 TTG-TCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTT 14084 Query 138600 TACAAAAATCTGCATG 138615 ||||| || |||||| Sbjct 14083 GACAAAGATTTGCATG 14068 >seq71 Length=102704 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | ||| || || | | | || |||||||| ||||||||||| ||| Sbjct 21252 CCGCCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTC 21311 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| || || || |||| | || ||||| |||||||| ||||| Sbjct 21312 AAAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGA 21371 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| ||||| || | | ||| | | || | ||||| ||| Sbjct 21372 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACC 21431 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| ||||| || ||||| || ||||| Sbjct 21432 TCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 21478 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | || |||||||| ||||||||||| ||| Sbjct 21480 CCACCACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTC 21539 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| ||||||||||| | | |||| || | ||||||||| ||||| Sbjct 21540 AAAGTACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGG 21599 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| || ||||| || | | ||| | | || | || || || Sbjct 21600 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACT 21659 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||| || || || ||||| ||||| || || ||||| Sbjct 21660 TCTAAAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 21706 >seq80 Length=97372 Score = 120 bits (132), Expect = 3e-22 Identities = 128/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | |||||| || | | || |||||||| ||||| ||||||||| Sbjct 13648 CCACCACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTC 13707 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | |||| ||||| |||||||| ||||| Sbjct 13708 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGA 13767 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGG 138556 |||||||| ||||| || ||||| || | | || | |||||||| Sbjct 13768 ATACCTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 13816 >seq815 Length=19846 Score = 114 bits (126), Expect = 1e-20 Identities = 421/654 (64%), Gaps = 13/654 (2%) Strand=Plus/Plus Query 153888 GGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACC 153947 ||||| | ||| ||||| | || || | |||| || ||||||| ||||| || | | Sbjct 16956 GGACAAAACAGAGACCAATCACCGCCGTCTCTGACACGCTGCATGAAGAGATCAGGAATC 17015 Query 153948 CAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGA 154007 ||||| || || | || ||||| || || || || ||| | ||| | || | Sbjct 17016 CAGAGAGCATAGAACAGATCGCGAGCTCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAA 17075 Query 154008 TTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTA 154067 | | | | | | ||||| || ||||||||||| | ||| | || | || || | Sbjct 17076 TCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGA 17135 Query 154068 CGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGT 154124 || || ||||| |||||||| | || || |||||||||| || || | |||||| Sbjct 17136 CGTTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGC 17195 Query 154125 TCCAGGCCGCTTGCGGTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCAC 154180 | ||| | | | |||||||| || ||| || | || | || || | Sbjct 17196 AGTAATCCGTTGGAGTAACCGTTGGTGCCGGCAATATATGAT----CCACTAGCACGAAT 17251 Query 154181 TTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCA 154239 | || | ||| | |||||||||||| || || ||| || || ||| ||| | Sbjct 17252 GTTGTGAATGTTCAAGCCAATGCCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTTGA 17310 Query 154240 GCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACA 154299 ||||| ||||| || ||||| ||| || | | ||||||||| || ||| ||| Sbjct 17311 GCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACA 17370 Query 154300 TTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTT 154359 |||| ||| | || || || ||| | || ||||| ||||| ||||| | ||| Sbjct 17371 TTTGGGGACGAGGTGTGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTT 17430 Query 154360 GGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCG 154419 ||||| | ||| || || || || | || ||||| || || || |||| | Sbjct 17431 CAGACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATTG 17490 Query 154420 CGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGAT 154479 | || ||||||| || || || |||||||| || | | ||||||||| | || | Sbjct 17491 CAACACGCATGATCAAATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAGGT 17550 Query 154480 ATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCAT 154533 | | |||||||||||| |||| || | ||||| | ||||| | |||| Sbjct 17551 AAGAACGCTCGAGGGTTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGTCAT 17604 >seq291 Length=50391 Score = 114 bits (126), Expect = 1e-20 Identities = 340/519 (66%), Gaps = 13/519 (3%) Strand=Plus/Minus Query 154023 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCC 154079 ||||| || ||||||||||| | ||| | || | || || |||||| ||||| Sbjct 27538 ATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCT 27479 Query 154080 TGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG 154139 |||||||| | || || |||||||||| || || | |||||| | ||| | | | Sbjct 27478 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 27419 Query 154140 GTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAAC 154195 |||||||| || ||| || | || | || || | | || | ||| | Sbjct 27418 TAACCGTTGGTGCCGGCAATGTATGAT----CCACTAGCACGAATGTTGTGAATGTTCAA 27363 Query 154196 GCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGC 154254 |||||| ||||| || || ||| || || ||| ||| |||||| ||||| | Sbjct 27362 GCCAATACCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 27304 Query 154255 CGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCG 154314 | ||||| ||| || | | |||||||||||| ||| ||||||| ||| | | Sbjct 27303 CTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTG 27244 Query 154315 TTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGT 154374 | || || ||| || || ||||| ||||| || || ||||| | ||||| | || Sbjct 27243 TGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTATTTTTCGGACATCAAGTTGT 27184 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || || || || | || ||||| || || || |||| || || ||||||| || Sbjct 27183 ATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATTGCAACACGCATGATCA 27124 Query 154435 TGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGG 154494 || || |||||||| || | | ||||||||| | || || | ||||||| Sbjct 27123 AATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGG 27064 Query 154495 TTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCAT 154533 ||||| |||| || | ||||| | ||||| | |||| Sbjct 27063 TTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGTCAT 27025 >seq439 Length=37054 Score = 107 bits (118), Expect = 2e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | || ||||||||||||||||| || ||| Sbjct 23600 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 23541 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | || ||||| ||||| || ||||| Sbjct 23540 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 23481 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTC 138554 |||||||| || || ||| ||||| || | |||| || | |||||| Sbjct 23480 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTC 23434 >seq175 Length=68572 Score = 107 bits (118), Expect = 2e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | || ||||||||||||||||| || ||| Sbjct 14550 CCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTC 14491 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||| |||||||||||||||| | || ||||| ||||| || ||||| Sbjct 14490 AAGGTACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGG 14431 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTC 138554 |||||||| || || ||| ||||| || | |||| || | |||||| Sbjct 14430 ATACCTTCCTTATCTTGGATCTTTTGCTTGACATTG-TCAATGGTGTC 14384 >seq686 Length=24674 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | ||| || || | | || || ||||||||||| || || ||| Sbjct 10775 CCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTC 10716 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||| |||||||||||||| | | || ||||| |||||||| ||||| Sbjct 10715 AAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGG 10656 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || || ||||| || | | ||| | | || | || || || Sbjct 10655 ATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACT 10596 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || || ||||| ||||| || || ||||| Sbjct 10595 TCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 10549 >seq862 Length=17893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 || ||| | || ||||| |||| || || || |||| || | ||||||||| | Sbjct 17563 ATTGAACAAGAATTTTTGACGGATGCTCTTCCCGTCGCTCTCATCGGCATGAACTCTGCC 17622 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA 52745 | ||||| |||||||||| || || || |||||||| |||| |||| | | | Sbjct 17623 TTGATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTCATGGTT--GCTCTTGGATTCG 17680 Query 52746 A--AGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 | || | || ||| |||||| ||||| |||||| ||| || || ||| | |||| Sbjct 17681 ACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCA 17740 Query 52804 AGACCAACTTTTTCGAGAAGCGAGTC 52829 |||||||||| || || ||||| ||| Sbjct 17741 AGACCAACTTCTTTGAAAAGCGTGTC 17766 >seq83 Length=96909 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 ||| |||||||||||||||| | |||| ||||| |||||||| ||||| |||||||| || Sbjct 41957 GTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTT 42016 Query 138519 GTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGG 138556 ||| || ||||| || | | || | |||||||| Sbjct 42017 GTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGG 42054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496252760102880