Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq71 145 2e-29 seq686 111 4e-19 seq769 107 5e-18 seq80 105 2e-17 seq815 102 2e-16 seq243 98.7 2e-15 seq439 84.2 5e-11 seq175 84.2 5e-11 >seq71 Length=102704 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||||| |||||||||| |||||| Sbjct 21258 CGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTA 21317 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| |||||||| || ||||| ||| ||| ||| Sbjct 21318 CGGCCATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCT 21377 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||||||||| || ||| | | || | | || || ||||| Sbjct 21378 TCCTTATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCAAG 21437 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| |||||||| || ||||| ||||| Sbjct 21438 GTAATGGTCTTACCAGTGAGAGTCTTGACAAAGATTTG 21475 Score = 123 bits (136), Expect = 6e-23 Identities = 164/227 (72%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| || || || |||||||||| |||||||||| |||||| Sbjct 21486 CGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTA 21545 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || || || || || ||||| || | ||| ||||| ||| || ||| Sbjct 21546 CGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCT 21605 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || ||||| | || | | ||| || || || Sbjct 21606 TCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAA 21665 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || |||||||| || || ||||| || || || ||||| |||||| Sbjct 21666 GTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTG---CATTTT 21709 >seq686 Length=24674 Score = 111 bits (122), Expect = 4e-19 Identities = 161/227 (71%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| || || ||||| | ||| || ||| |||||| Sbjct 10769 CGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTA 10710 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || || || || ||||| |||||||| || ||||| ||| || ||| Sbjct 10709 CGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCT 10650 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||||||||| || ||||| | || | | ||| || || || Sbjct 10649 TCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACTTCTAAA 10590 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || ||||| || || ||||| || || || ||||| |||||| Sbjct 10589 GTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTG---CATTTT 10546 >seq769 Length=21522 Score = 107 bits (118), Expect = 5e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| || |||||||| | ||| ||||| | || | |||||| Sbjct 14280 AGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCT 14221 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || ||||||||||| || || || ||| ||| ||||| || Sbjct 14220 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 14161 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||||| || || |||| ||||| | | ||| || || || || || ||| Sbjct 14160 TGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTC 14101 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 14100 TTTCCAGTAAGTGTCTTGACAAAGATTTG 14072 >seq80 Length=97372 Score = 105 bits (116), Expect = 2e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||||||||| || |||||||||| ||| ||||| ||| || Sbjct 13654 CGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAAGGTA 13713 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||| ||| Sbjct 13714 CGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCT 13773 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 || || |||||||||||||| ||| || | |||||| Sbjct 13774 TCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTC 13814 >seq815 Length=19846 Score = 102 bits (112), Expect = 2e-16 Identities = 173/248 (70%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 || ||||| |||| ||||| || |||| ||||| |||||| |||||||| | | Sbjct 16785 GCATCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATAC 16844 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 || || | ||| || || | || ||| ||||||||||| ||||||| | |||||| Sbjct 16845 CACAGCTTTTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAG 16904 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947 || | | || || | || | ||||| | | || ||||| || || |||||||| Sbjct 16905 AGAGCAACAAACTCATCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAAC 16964 Query 167948 AGACTCCAATTTCCATCGGTCTC-GACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 168006 ||| ||||| || | ||||| ||| | || ||||||||| || | | |||| | || Sbjct 16965 AGAGACCAATCACC-GCCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGC 17023 Query 168007 GTAGAACA 168014 ||||||| Sbjct 17024 ATAGAACA 17031 >seq243 Length=56764 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | || ||||| || |||||||||| ||| ||||| | || | |||||| Sbjct 37866 AGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCT 37925 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || || ||||||||||| || || || ||| ||| ||||| || Sbjct 37926 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 37985 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| ||||| || || |||| ||||| | | || || || || || ||| || Sbjct 37986 TGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATC 38045 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || ||||| ||||| Sbjct 38046 TTTCCAGTAAGTGTCTTGACAAAGATTTG 38074 >seq439 Length=37054 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||| | |||||| ||| ||| || Sbjct 23594 CGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTA 23535 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || || || |||||||| |||||||| || || || ||| || ||| Sbjct 23534 CGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCT 23475 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || || || ||||||||||| || Sbjct 23474 TCCTTATCTTGGATCTTTTGCTTGAC 23449 >seq175 Length=68572 Score = 84.2 bits (92), Expect = 5e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || || || |||||||| | |||||| ||| ||| || Sbjct 14544 CGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTA 14485 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || || || |||||||| |||||||| || || || ||| || ||| Sbjct 14484 CGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCT 14425 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCAC 199554 || || || ||||||||||| || Sbjct 14424 TCCTTATCTTGGATCTTTTGCTTGAC 14399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178898126934118