Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq686 161 2e-34 seq769 152 1e-31 seq80 150 4e-31 seq71 150 4e-31 seq243 145 2e-29 seq83 134 3e-26 seq439 127 5e-24 seq175 127 5e-24 seq291 95.1 3e-14 seq815 87.8 4e-12 >seq686 Length=24674 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||||||||| || ||||||||||| || ||||| | ||| | || ||||| Sbjct 10758 AACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTACGACCGTCTTC 10699 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| || ||||| ||||| || || ||||||||||| ||||| || ||||| || ||||| Sbjct 10698 GAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCTTCCTTATCTTG 10639 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| ||||||||||| || || || | || ||| ||| ||||| | |||| ||||| Sbjct 10638 AATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACTTCTAAAGTAATTGTCTT 10579 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | ||| |||||||| | |||||||| Sbjct 10578 GCCGGTAAGAGTCTTTACGAAGATTTGCATTT 10547 >seq769 Length=21522 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||| || || |||||||| || || ||| || || | ||||||||||| || Sbjct 14272 GTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTG 14213 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||| || Sbjct 14212 TTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTT 14153 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || || ||||| ||| ||| ||||| | |||| |||||||| || Sbjct 14152 TTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTCTTTCCAGT 14093 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 14092 AAGTGTCTTGACAAAGATTTGCAT 14069 >seq80 Length=97372 Score = 150 bits (166), Expect = 4e-31 Identities = 129/157 (82%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | ||| ||||| || || ||||| || || || ||| |||| || | || |||| Sbjct 13665 AACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAAG-GTACGACCGTCTT 13723 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||| || ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||| Sbjct 13724 CGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTT 13783 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 |||| |||||||||||||| ||||||||||| ||||| Sbjct 13784 GAATCTTTTGCTTGACGTTGTCAATGGTGTCGGAACT 13820 >seq71 Length=102704 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || || || ||||| || ||||| || | ||| | ||||| || || || Sbjct 21503 GTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTG 21562 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| || |||||||||| |||||||| ||||| || ||||| ||||||||||| || Sbjct 21563 TTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTT 21622 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || || | || ||| ||| ||||| | |||| |||||| || || Sbjct 21623 TTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGT 21682 Query 195117 CAAAGTTTTTACGAACACTTGCATTT 195142 | ||| |||||||| | |||||||| Sbjct 21683 AAGAGTCTTTACGAAGATTTGCATTT 21708 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || || || ||||| || ||||| || | ||| | ||||| || Sbjct 21269 AACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGGCCATCCTC 21328 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || ||||| || || ||||||||||| |||||||| ||||| || ||||| Sbjct 21329 AAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCTTG 21388 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || ||||||||||| || ||||| | || || || || || | ||||| ||||| Sbjct 21389 GATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCAAGGTAATGGTCTT 21448 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | |||||| Sbjct 21449 ACCAGTGAGAGTCTTGACAAAGATTTGCAT 21478 >seq243 Length=56764 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| || || ||||| || || || ||| || || | ||||||||||| || Sbjct 37875 TGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTGT 37934 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| || |||||||| || |||||||| ||||| ||||||||||||||| Sbjct 37935 TTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATTTTT 37994 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || || || || ||||| ||| || ||||| | |||| | ||||||| || Sbjct 37995 TGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATCTTTCCAGTA 38054 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 38055 AGTGTCTTGACAAAGATTTGCAT 38077 >seq83 Length=96909 Score = 134 bits (148), Expect = 3e-26 Identities = 92/104 (88%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || |||||||| || ||||| || |||||||| ||||||||||| |||||||| ||||| Sbjct 41955 CCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCC 42014 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 ||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct 42015 TTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGAACT 42058 >seq439 Length=37054 Score = 127 bits (140), Expect = 5e-24 Identities = 124/157 (79%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | |||||| || || || |||||||| |||||||| |||| || | || |||| Sbjct 23583 AACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAG-GTACGACCGTCTT 23525 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||| || ||||| ||||| || || |||||||| || ||||| || ||||| || |||| Sbjct 23524 CGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTT 23465 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 | || ||||||||||| || ||||||||||| || || Sbjct 23464 GGATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 23428 >seq175 Length=68572 Score = 127 bits (140), Expect = 5e-24 Identities = 124/157 (79%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | |||||| || || || |||||||| |||||||| |||| || | || |||| Sbjct 14533 AACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAG-GTACGACCGTCTT 14475 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 |||| || ||||| ||||| || || |||||||| || ||||| || ||||| || |||| Sbjct 14474 CGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTT 14415 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT 195086 | || ||||||||||| || ||||||||||| || || Sbjct 14414 GGATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 14378 >seq291 Length=50391 Score = 95.1 bits (104), Expect = 3e-14 Identities = 238/357 (67%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 160513 CTGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAAAAGCCCGGAGGTGATGACCTG 160570 |||||| | ||||| || |||| | || ||||||||| | | || | ||| Sbjct 27524 CTGGCATGCAGACATTTTCACCTTTTTAGACTTGCGAAAAAACTTTG--GTAAAGACGAA 27581 Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630 || ||||| | || | ||||| || ||||| | | |||||||||||| || | || Sbjct 27582 ATCAGAGCTCGTGATCTGTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGCGTGTC 27641 Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTT 160690 | |||| ||| |||||| || || || ||||||||||| |||||| | |||| || Sbjct 27642 AGAGACGGTGGTGATTGGTCTCTATTTTGCCCCAATGAAGCTCCTGGATTACATGAAGTC 27701 Query 160691 TATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAG 160750 | ||| ||| || | |||| ||||||| ||||||| || ||||||| | | | Sbjct 27702 TGGGGTGACGAATTTGTTGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGGTAGAGAA 27761 Query 160751 GTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATG 160810 | ||||| ||| | |||||| || ||| | | || ||| ||| |||| Sbjct 27762 ACAATCAAGGCTCAAAAGCTGTGGTATGCCATTTTGGAGGCACAAACGGAGACTGGTAAT 27821 Query 160811 CCCTTTATCGCATACAAGGATGCCATCTGTC-GCAAGAGTAACCAGAAGAACTTTGG 160866 || || || || ||||||| | | | | | |||||||| ||| | ||||| || Sbjct 27822 CCATTCATACTCTATAAGGATG-CTTGTAACAGAAAGAGTAATCAGCAAAACTTGGG 27877 >seq815 Length=19846 Score = 87.8 bits (96), Expect = 4e-12 Identities = 199/297 (67%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 160571 ATGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTG 160630 || ||||| | || | ||||| || |||||| | | ||||| |||||| || | || Sbjct 17047 ATCAGAGCTCGCGATCTGTTCTATGCTCTCTGGATTCCTGATCTCTTCATGCAGCGTGTC 16988 Query 160631 AAAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTT 160690 | |||| || |||||| || || ||||||||||| || |||||| | |||| | Sbjct 16987 AGAGACGGCGGTGATTGGTCTCTGTTTTGTCCCAATGAGGCTCCTGGATTACATGAAATC 16928 Query 160691 TATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAG 160750 | ||| ||||| | |||| ||||||| ||||||| || |||||||| | | | Sbjct 16927 TGGGGTGATGAGTTTGTTGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAA 16868 Query 160751 GTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATG 160810 | ||||| ||| | |||||| || ||| | | || ||| ||| |||| Sbjct 16867 ACAATCAAGGCTCAAAAGCTGTGGTATGCCATTTTGGAAGCTCAAACGGAGACAGGTAAT 16808 Query 160811 CCCTTTATCGCATACAAGGATGCCATCTGTC-GCAAGAGTAACCAGAAGAACTTTGG 160866 || || || || ||||||| | | | | | |||||||| ||| | ||||| || Sbjct 16807 CCGTTCATACTCTATAAGGATG-CTTGTAACAGAAAGAGTAATCAGCAAAACTTGGG 16752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109459509527918