Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq453 107 3e-18 seq49 105 9e-18 >seq453 Length=36563 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 104990 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATC 105049 ||||||||| | |||||| | || ||||||||||||||||| ||| || |||| | Sbjct 19110 GAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGTT 19169 Query 105050 GACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109 || |||||||| || ||||| || ||||| || || |||||| ||||| || || ||| Sbjct 19170 GATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCGACACT 19229 Query 105110 ATAAAAAATAACCC 105123 |||||||| || || Sbjct 19230 ATAAAAAACAATCC 19243 >seq49 Length=122128 Score = 105 bits (116), Expect = 9e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 104990 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATC 105049 ||||| ||| | |||||| | || ||||||||||||||||| ||| || |||| | Sbjct 120094 GAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGTT 120153 Query 105050 GACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109 || |||||||| || ||||| || ||||| || || |||||| ||||| || || ||| Sbjct 120154 GATTGTGATACTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTGACACT 120213 Query 105110 ATAAAAAATAACCCCGGGTGTCGAAGAATAATTATA 105145 |||||||| || ||| ||| ||||| ||| || Sbjct 120214 ATAAAAAACAATCCCACTGATCGCAGAATCATTCTA 120249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658390410517840