Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq862 210 3e-49 seq656 201 1e-46 >seq862 Length=17893 Score = 210 bits (232), Expect = 3e-49 Identities = 314/445 (71%), Gaps = 3/445 (1%) Strand=Plus/Minus Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 |||| || | ||| ||||| ||| ||| | ||||||||| | || ||||||||||| Sbjct 17500 TAAATAAAAGACAAGCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGC 17441 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 || || || || ||||| | ||| | |||||| | |||||| || | ||||| || | Sbjct 17440 TGAATGTCAAACCGGGCATCAGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAAC 17381 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| ||||| |||||||| || || ||||| || ||||||||| | | ||| |||| Sbjct 17380 CAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAAA---GAAC 17324 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | ||||||||||| | |||||| |||||| || | ||| || || | Sbjct 17323 CGTTAGAGGAAATCCATTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGT 17264 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || ||||| | | ||| |||| | ||| | |||||||| ||||| | | Sbjct 17263 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAA 17204 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || |||| | ||||||||||||||| || ||||| ||||| ||||| ||| Sbjct 17203 GACTGTAAGTTTCTGCGTGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 17144 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | | || || | | |||| | | | | |||||||||||||| || |||| Sbjct 17143 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 17084 Query 37585 CACTAGCTGCAAAGAAAGCAAGAAC 37609 | | | |||||||| || | ||| Sbjct 17083 CTGAACCAGCAAAGAAGGCCAAAAC 17059 >seq656 Length=25916 Score = 201 bits (222), Expect = 1e-46 Identities = 312/444 (70%), Gaps = 4/444 (1%) Strand=Plus/Plus Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 |||| || | ||| ||||| ||| ||| | |||||||| | || ||||||||||| Sbjct 763 TAAATAAAAGACAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGC 822 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 || || || || ||||| ||||| | ||| || | |||||| || | ||||| || | Sbjct 823 TGAATGTCAAACCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATAGAAGCAAAGGAAC 882 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| ||||| |||||||| || || ||||| || |||||||| | | |||| ||| Sbjct 883 CAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAG---AAC 939 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | |||||||| || | |||||| |||||| ||| | ||| || || | Sbjct 940 CGTTAGAGGAAATCCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAGGGGATAGTGT 999 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || || || | | ||| |||| | ||||| | |||||||| ||||| | | Sbjct 1000 CAATAGCAGAAAATAGCATTTCTTTCTCTTGATTATCTTTGATATAAGTGTCAATCAAAA 1059 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || |||| | |||||| |||||||| || ||||| ||||| ||||| ||| Sbjct 1060 GACTGTAAGTTTCTGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 1119 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | | || || | | |||| | | | | |||||||||||||| || |||| Sbjct 1120 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 1179 Query 37585 CACTAGCTGCAAAGAAAG-CAAGA 37607 | | | |||||||| | ||||| Sbjct 1180 CTGAACCAGCAAAGAAGGCCAAGA 1203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592305294246160