Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq243 140 3e-28 seq769 136 3e-27 seq71 134 1e-26 seq686 132 4e-26 seq439 98.7 8e-16 seq175 98.7 8e-16 >seq243 Length=56764 Score = 140 bits (154), Expect = 3e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| |||||||| ||||| || || || ||| | || | |||| || Sbjct 37869 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCG 37928 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| ||||| || | ||| |||||||| || ||||| ||||| || |||||| Sbjct 37929 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 37988 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||||||||||||| | || | ||||||||| | || ||||| | ||| | | | || Sbjct 37989 ATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATCTTT 38048 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || ||||| || |||||| Sbjct 38049 CCAGTAAGTGTCTTGACAAAGATTTGCATG 38078 >seq769 Length=21522 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || ||||| |||||||| ||||| || || || ||| | || | |||| || Sbjct 14277 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCG 14218 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| ||||| || | ||| |||||||| || ||||| ||||| || |||||| Sbjct 14217 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 14158 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || |||||||||||| | || | ||||||||| | ||| ||||| | ||| | || || Sbjct 14157 ATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTCTTT 14098 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || ||||| || |||||| Sbjct 14097 CCAGTAAGTGTCTTGACAAAGATTTGCATG 14068 >seq71 Length=102704 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||||||||| ||||| || ||||| || | ||| | |||| || Sbjct 21498 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCA 21557 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| ||||| ||||| || | | |||||| || || || || ||||| || |||||| Sbjct 21558 AGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 21617 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || ||| |||| | | | ||||| | ||| ||||| | ||| | ||| ||| Sbjct 21618 ATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTG 21677 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | ||| ||||| || || ||||| Sbjct 21678 CCGGTAAGAGTCTTTACGAAGATTTGCAT 21706 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||||||||| ||||| || ||||| || | ||| | | | Sbjct 21263 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGGCC 21322 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || || || || | ||| ||||| || || ||||| ||||| || Sbjct 21323 ATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTT 21382 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||| || ||||| || ||| |||| | | | ||||| | || || || | || | Sbjct 21383 ATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCAAGGTAAT 21442 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | ||| || ||||| || ||||| Sbjct 21443 GGTCTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 21478 >seq686 Length=24674 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || ||||| |||||||||||||| || || ||||| | ||| | | Sbjct 10764 ACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTACGACC 10705 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||| ||||| || || || | ||| ||||| || || || || ||||| || Sbjct 10704 GTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCTTCCTT 10645 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||| ||||| || ||| |||| | | | ||||| | ||| ||||| | ||| | Sbjct 10644 ATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACTTCTAAAGTAAT 10585 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || |||||||| | ||| ||||| || || ||||| Sbjct 10584 TGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 10549 >seq439 Length=37054 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||||||||| ||||| || |||||||| | || | | Sbjct 23589 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACC 23530 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||| ||||| || || || | ||| |||||||| || || || ||||| || Sbjct 23529 GTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTT 23470 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||| || ||||| || ||| | || | |||||||| Sbjct 23469 ATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 23431 >seq175 Length=68572 Score = 98.7 bits (108), Expect = 8e-16 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||||||||| ||||| || |||||||| | || | | Sbjct 14539 ACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACC 14480 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||| ||||| || || || | ||| |||||||| || || || ||||| || Sbjct 14479 GTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTT 14420 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412 |||||| || ||||| || ||| | || | |||||||| Sbjct 14419 ATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGA 14381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396270894734778