Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq355 134 3e-26 seq205 134 3e-26 >seq355 Length=43543 Score = 134 bits (148), Expect = 3e-26 Identities = 282/415 (68%), Gaps = 18/415 (4%) Strand=Plus/Plus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| || ||||| ||||| ||| ||||| || || || || | || ||| Sbjct 32509 TTGGTGAGCCTGGTGTGGGTAAGACAGCCATCGTCGAAGGTTTGGCTCGTCGTATCATCG 32568 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTT-TCTTTGAATATGGGTGCA 150520 | |||| || || | ||| | || | ||| | || || ||| | ||||| || Sbjct 32569 AACGTGACGTACCTCAGTCTCTCCAA----TGCAAACTGTTCTCATTGGACATGGGCGCT 32624 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580 || | ||||||| | ||||||||||||||||| ||||||||| | | | | | || Sbjct 32625 TTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTGAAA 32684 Query 150581 GAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTATG 150637 ||| | || ||| || || | ||||| |||| || ||||||||||| ||| || | Sbjct 32685 GAAGTCAAGGAATCTGAAGAAGGTATTATTTTGTTTATTGATGAAATCCACACTGTTCTT 32744 Query 150638 GGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTA 150697 ||||| ||| | || | |||||| |||| |||| || | || ||| || Sbjct 32745 GGTGCCGGT---AAAGGTGAGGGTTCTATGGACGCTGCCAATCTGCTGAAGCCTATGCTG 32801 Query 150698 TCTCGCGGTGAAATTCGTGTCATCGGTGCAACA--ACCTACGATGAATATCGTAAACACA 150755 ||||||||||| | || ||| || || ||| || ||| |||||||||| || | Sbjct 32802 GCTCGCGGTGAATTGCGATGCATTGGCGCTACAACACTTAC--TGAATATCGTGAA---A 32856 Query 150756 TTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 | ||||||||| | ||| | ||||||||||| ||||| ||| | | ||||| Sbjct 32857 TCGAAAAAGATCCTGCATTCGAGCGTCGTTTCCAAAAGGTCGATGTCGGAGAACC 32911 >seq205 Length=64096 Score = 134 bits (148), Expect = 3e-26 Identities = 282/415 (68%), Gaps = 18/415 (4%) Strand=Plus/Plus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| || ||||| ||||| ||| || || || || || || | || ||| Sbjct 52503 TTGGTGAGCCTGGTGTGGGTAAGACAGCCATTGTCGAGGGCTTGGCTCGTCGTATCATCG 52562 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTT-TCTTTGAATATGGGTGCA 150520 | |||| || || | ||| | | || ||| | || || ||| | ||||| || Sbjct 52563 AACGTGACGTGCCTCAGTCTCTCCA----GTGCAAACTGTTCTCATTGGACATGGGCGCC 52618 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580 || | ||||||| | ||||||||||||||||| ||||||||| | | | | | || Sbjct 52619 TTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTGAAA 52678 Query 150581 GAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTATG 150637 ||| | || ||| || || | | ||| |||| || ||||||||||| ||| || | Sbjct 52679 GAAGTTAAGGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACTGTTCTT 52738 Query 150638 GGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTA 150697 ||||| ||| | || | |||||| ||||| |||| || | |||||| || Sbjct 52739 GGTGCCGGT---AAAGGTGAGGGTTCTATGGATGCTGCCAATCTGCTGAAACCTATGCTG 52795 Query 150698 TCTCGCGGTGAAATTCGTGTCATCGGTGCAACA--ACCTACGATGAATATCGTAAACACA 150755 |||| ||||| | || |||||| || ||| || ||| |||||||||| || | Sbjct 52796 GCTCGTGGTGAGCTGCGATGCATCGGCGCTACAACACTTAC--TGAATATCGTGAA---A 52850 Query 150756 TTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 | ||||||||| | ||| | ||||||||||| ||||| ||| ||| ||||| Sbjct 52851 TCGAAAAAGATCCTGCATTCGAGCGTCGTTTCCAAAAGGTCGATGTTGGAGAACC 52905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147567550757892