Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq291 172 1e-37 >seq291 Length=50391 Score = 172 bits (190), Expect = 1e-37 Identities = 858/1345 (64%), Gaps = 46/1345 (3%) Strand=Plus/Minus Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 ||||| |||||||| |||||| | || |||| ||||| ||||||||| ||| ||| Sbjct 28705 TCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTCTTGTAGAGGTCT 28646 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGC 212849 || | || | |||| || ||| | |||||| | ||| || | || ||| ||| Sbjct 28645 TTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCAGCCATGATCATA 28586 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGG-CACT---TGACCAGGTG 212905 | | || || || |||||||| ||| | | || ||| | |||| Sbjct 28585 TTCTT---CACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGTAACCA---- 28533 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||| ||||| || || | |||||||||||||| | | ||||||||| || ||||| Sbjct 28532 AGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGATGTGTA 28473 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 || || | | || ||| || || || || | |||| ||| || ||||| ||||| Sbjct 28472 AGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGC 28413 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 ||||| ||| ||| | || || |||| | | || | || | |||||||| Sbjct 28412 AACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGCCCAGTC 28353 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| ||| ||| || || ||||||||||| | |||| ||| || || Sbjct 28352 CCAA-----AGATTGGTAGGTGTG----ACATTCCACATGTCGTATTGCAGGATACCCTT 28302 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 | || |||||||| | || | |||||| |||| || | |||| |||||| || Sbjct 28301 GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAAGA 28242 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 || | || |||||| | ||||||||||||||| || | |||| | || |||||| || Sbjct 28241 GGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTC 28182 Query 213266 TGGGGACGTGAAGGGCATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 ||| || ||| || || | | | | ||| || || | || || || || | Sbjct 28181 TGGTGAATCGAATGG-ATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACCTA 28123 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || || ||||| |||||| ||| || ||| || || | || || | ||| Sbjct 28122 AACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGC-TTCGATGACAGGATAGTAATTG 28064 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| | ||| | ||| || ||||| |||| | ||| | | | Sbjct 28063 ATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGG 28004 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 || | || | | | | | |||| | ||| || || ||| ||||| ||| Sbjct 28003 AAAT--CATACTTTTCTCTATTGAT-CACATAGGTAGGTAGAGCAATGGAGGCCAAGTTA 27947 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || || || || || | || || ||| || | || || || |||||||||||||| Sbjct 27946 CAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCAC 27887 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 ||| || |||| ||| || || || |||| ||| || |||||| ||||| ||| Sbjct 27886 TTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATG 27827 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCT 213681 | || || ||||| || | | ||| | |||| ||| || | |||| Sbjct 27826 AATGGATTACCAGTCTCCGTTTGTGCCTCCA--AAATGGCATACCACAGCTTTTGAGCCT 27769 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 ||| || || || | | | ||||| | ||| ||||| | |||| Sbjct 27768 TGATTGTTTCTCT-ACCTCTTCCTTC--ACGTTCGTATTTTTCATAGAGAGCAACAAATT 27712 Query 213742 CGTGGCCCCAGAC--CCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAGT 213798 ||| |||||||| | ||| | ||| ||| | || ||| || | || ||| | Sbjct 27711 CGTCACCCCAGACTTCATGT--AATCCAGGAGCTTCAT-TGGGGCAAAATAGAGACCAAT 27655 Query 213799 CCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGT 213858 | || | |||||||| | ||||||||| || || || ||||| || || |||||| | Sbjct 27654 CACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGAT 27595 Query 213859 CCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGT 213918 | | | || | ||||| ||| ||||||| |||| |||| |||| || |||| Sbjct 27594 CACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGT 27535 Query 213919 CCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGT 213975 | || ||||| || |||| ||| || || || ||||||| || | || ||||| || | Sbjct 27534 CTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGAT 27475 Query 213976 CCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTC 214035 | || | ||| ||||||| | || || | ||| | | |||||||| | | Sbjct 27474 CGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAGTAAC 27415 Query 214036 CGTTGGTTCCCGCTATATACGAGCC 214060 ||||||| || || || || || || Sbjct 27414 CGTTGGTGCCGGCAATGTATGATCC 27390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931514704975360