Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq291 111 3e-19 seq815 109 1e-18 >seq291 Length=50391 Score = 111 bits (122), Expect = 3e-19 Identities = 716/1135 (63%), Gaps = 52/1135 (5%) Strand=Plus/Minus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || || || || || || || || | |||||||| || ||| ||| ||| ||||| Sbjct 28303 TTGGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 28244 Query 221411 GACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGC 221469 || || || | |||||| ||||||||||| |||||||| |||| | |||||| Sbjct 28243 GAG-GCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGC 28185 Query 221470 CTCGGGAGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTC 221528 || || ||| ||| || ||| || | |||||| |||||| | || || || | Sbjct 28184 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGT-GTCGGCTAAACCTTGAACAC 28126 Query 221529 CGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGT 221588 | | ||| || || || |||||| ||||||| | ||||| || ||||| | | Sbjct 28125 CTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAAT 28066 Query 221589 TGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648 ||| || || | ||||| | ||| |||||| || || || ||| ||| || | Sbjct 28065 TGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTT 28006 Query 221649 GGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 || || | ||| | | | | |||| | | ||| |||| Sbjct 28005 GGAAAT------CATACTTTTCTCTATTGAT---------CACATAGGTAGGTAGAGCAA 27961 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTC----CTTGTTGGTATACTGTATGATCTCT 221764 | ||||| |||||| || || || || || |||| |||| | | || ||| Sbjct 27960 TGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTTGA--GTATTCAACA--ATTTCT 27905 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCA 221824 ||||| ||||||||||||||||| || |||| || | |||||| ||| | || | Sbjct 27904 GTACACAGGTTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAA 27845 Query 221825 GCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCC 221884 || ||||| ||||| || || ||| ||||||||| || ||| ||| ||| | | Sbjct 27844 GCATCCTTATAGAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATAC 27785 Query 221885 CAGAGTTCTCTGGCGCTCACCGT-------CCTCTTGACTGCACCCTCGGTCTTTTCATA 221937 || || | | || | | || |||||| || ||| ||| |||||||| Sbjct 27784 CACAGCTTTTGAGCCTTGATTGTTTCTCTACCTCTTC-CTTCACGTTCGTATTTTTCATA 27726 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 |||||| |||| | ||||| | | || | | || ||| Sbjct 27725 G-------AGAGCAA--CAAATTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATT 27675 Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 ||| || | ||| ||| | |||| |||| | ||||||||| || || || | Sbjct 27674 GGGGCAAAATAGAGACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAAC 27615 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGG-TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116 ||| || || | || ||||| | | || | | || || || |||||| | || Sbjct 27614 CCAGAGAGCATAGAACAGATCACGAGCTCTGATT-TCGTCTTTACCAAAGTTTTTTCGCA 27556 Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176 || ||||| |||||||| || ||||| || |||| || | || | ||||| | Sbjct 27555 AGTCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCG 27496 Query 222177 GTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCG 222236 | ||||| || || || ||||| || | || | |||||| | || || | | Sbjct 27495 GACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGG 27436 Query 222237 GTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT 222296 | | | ||||||||| |||||||||||| |||||| | || | || | | || Sbjct 27435 GCAATAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGT 27376 Query 222297 TACTGGCAG-ACATGCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTCTTGAG 222354 | || | || ||| ||||| || || ||| || ||||| || ||| | ||||| Sbjct 27375 T-GTGAATGTTCAAGCCAATACCGCCTGC-TGTCTTGGAGATTTGAGCACAGATTTTGAG 27318 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 || || ||| || || || || || ||||| | | | |||| |||||||| ||||| Sbjct 27317 CGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACAT 27258 Query 222415 CT-GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | | || ||| | | || ||||| || || ||||| |||||||| ||||| Sbjct 27257 TTGGGGACGAGGT-GTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTA 27204 >seq815 Length=19846 Score = 109 bits (120), Expect = 1e-18 Identities = 728/1157 (63%), Gaps = 42/1157 (4%) Strand=Plus/Plus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || || || ||||| || || || | ||||||| || ||| ||| ||| |||| Sbjct 16326 TTGGATACAGGACTGCCTTCATAGGTTTCGTAGGATCCATACTTTTCAGCCAACTCGCAG 16385 Query 221411 GACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGC 221469 || || || | |||||| || |||||||| |||||||| |||| || |||||| Sbjct 16386 GAG-GCTTCCAAGGCAGCATGATAGATGGTTTCAAAGATTTGAATGTTCAGCTGCTTGGC 16444 Query 221470 CTCGGGAGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTC 221528 || || ||| ||| || ||| || | |||||| |||||| | || || || | Sbjct 16445 TTCAGGTGAATCGAATGGATAACGAAGAGCCATGAAAGT-GTCGGCTAAGCCTTGAACAC 16503 Query 221529 CGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGT 221588 | | ||| || || || |||||| ||||||| | ||||| || || || | | Sbjct 16504 CTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGGTAGTAAT 16563 Query 221589 TGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648 ||| ||||| | ||||| | ||| |||||| || || || ||| ||| || | Sbjct 16564 TGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTT 16623 Query 221649 GGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 || || | ||| | | | |||| | | || |||| Sbjct 16624 GGAAAT------CATACTTTTCTCTATTAAT---------CACATAGGTAGGCAGAGCAA 16668 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 | ||||| |||||| || || || || || | | || | | || ||||||| Sbjct 16669 TGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTAC 16728 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGT 221828 | ||||||||||| ||||| || |||| || | |||||| ||| | || ||| | Sbjct 16729 ACAGGTTGCTGCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCAT 16788 Query 221829 CCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGA 221888 |||| ||||| || || ||| || |||||| ||||| ||| ||| | ||| | Sbjct 16789 CCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACA 16848 Query 221889 GTTCTCTGGCGCTCACCGTC-CTCTTGA-----CTGCACCCTCGGTCTTTTCATACCCGG 221942 | | | || | | || |||| | || ||| ||| |||||||| Sbjct 16849 GCTTTTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAG---- 16904 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 |||||| |||||| ||||| | || | | || ||| | ||||| Sbjct 16905 ---AGAGCAA--CAAACTCATCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGAC 16959 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 | | |||| ||| | | |||| |||| | |||||||||||| || || ||||| | Sbjct 16960 AAAACAGAGACCAATCACCGCCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGA 17019 Query 222063 GCGCCTGAAAGAGATCTCTGG-TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCC 222121 | || | || ||||| | | || | | || || ||| |||||| | || ||| Sbjct 17020 GAGCATAGAACAGATCGCGAGCTCTGATT-TCGTCTTTGCCAAAGTTTTTTCGCAAATCT 17078 Query 222122 AAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGC 222181 ||||| |||||||| || ||||| || |||| || | || | ||||| || || Sbjct 17079 AAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGT 17138 Query 222182 TTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACC 222241 || || || || ||||| || | || | |||||| | || || | || | Sbjct 17139 TTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAGT 17198 Query 222242 AGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG 222301 | ||||||||| |||||||||||| ||| || | || | || | | ||| || Sbjct 17199 AATCCGTTGGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTG-TG 17257 Query 222302 GCAGA-CATGCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTCTTGAGAGTGT 222359 | || ||| || || || || ||| || ||||| || ||| | ||||| || | Sbjct 17258 AATGTTCAAGCCAATGCCGCCTGC-TGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCT 17316 Query 222360 CCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG 222419 | ||| || || || || || ||||| | | | |||| || ||||| ||||| || | Sbjct 17317 CATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGG 17376 Query 222420 -ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGAC 222478 | |||| | | | ||||| | || ||||| |||||||||||||| | |||| Sbjct 17377 GACGAGGTGTGCCTG-CATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGAC 17435 Query 222479 ATCAGATCGTACGTCTC 222495 |||| | ||| ||||| Sbjct 17436 ATCAAGTTGTATGTCTC 17452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928826757189760