Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq205 84.2 5e-11 >seq205 Length=64096 Score = 84.2 bits (92), Expect = 5e-11 Identities = 178/259 (69%), Gaps = 15/259 (6%) Strand=Plus/Plus Query 48484 TAACTGCTGGTACAAAATACCGTGGTGAATTCGAAGAACGTATGGAAGGTATTATTAAAG 48543 ||| ||||||| | || || ||||||||||| ||||||||| | | | | | | |||| Sbjct 52620 TAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTGAAAG 52679 Query 48544 AACTTAAAAAACGAGAA-AATGTA--ATTTTGTTCATTGATGAAGTACATATTATGATGG 48600 || |||| || ||| || ||| |||||||| ||||||||| | || | | | | | Sbjct 52680 AAGTTAAGGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACTGTTCTTG 52739 Query 48601 GTGCTGGT---GGTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCAC 48657 |||| ||| ||| || || ||||||||| |||| | |||||||| | Sbjct 52740 GTGCCGGTAAAGGT--GAG----GGTTCTATGGATGCTGCCAATCTGCTGAAACCTATGC 52793 Query 48658 TTTCACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACA 48717 | | |||||||| | || ||||| || ||||| | |||||||| ||| | Sbjct 52794 TGGCTCGTGGTGAGCTGCGATGCATCGGCGCTACAACACTTACTGAATATCG--TGAA-A 52850 Query 48718 TTGAAAAAGATGCTGCATT 48736 | ||||||||| ||||||| Sbjct 52851 TCGAAAAAGATCCTGCATT 52869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106435569737648