Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq228 96.9 2e-15 >seq228 Length=59556 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24683 ACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAA 24742 ||||| ||| ||| ||| | ||| ||||| ||||| || ||| ||||||||| | ||| Sbjct 46527 ACTGCAGGTCTAGATCTCAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAA 46468 Query 24743 AAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGA 24802 || ||||| || || || || ||| ||||| | | |||||| ||||| |||||| Sbjct 46467 AAGTGCATAGAGGTCAGCTTGCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGA 46408 Query 24803 GCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATA 24862 | |||| | |||| | |||||| || || | |||||| || ||| | || || Sbjct 46407 GATTGGTCGATAAAAGCTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATC 46348 Query 24863 TCGTAAGCTGTTTTGTATCTCTCTTT 24888 || | ||||||||||| || ||| Sbjct 46347 TCCCATACTGTTTTGTATAGCTTTTT 46322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253035207580550