Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq145 288 1e-72 seq107 255 8e-63 >seq145 Length=75589 Score = 288 bits (318), Expect = 1e-72 Identities = 530/766 (69%), Gaps = 21/766 (3%) Strand=Plus/Plus Query 47553 AACCAATTGTTTAAAAGAAGTTTTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGC 47612 |||||||| | ||||| | || | | ||| ||||||| | | |||||||| | | Sbjct 43997 AACCAATTCGTCAAAAGTAACCTTGCGCTTCCAGCCCAATTCTGTGTTTGCCTTTGTAGG 44056 Query 47613 ATCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAGTCAATTCTGATA-- 47670 |||||| |||||| || ||||||||||||||||| || || | |||||| | | | Sbjct 44057 ATCACCCAATAAGAGATCAACTTCAGCAGGACGGAAGTACTTGGGGTCAATGCGCACACG 44116 Query 47671 -ACCGTTTTACCA---TCAGAATCAATACCAACTTCATCAAGACCAGAACCTTCCCATCT 47726 ||| || || |||| ||| |||||||||| | | ||| ||||||||| Sbjct 44117 GACC---TTGCCTGTTTCAGCATCTTTACCAACTTCGTTCACACCTTCACCTTCCCAAAC 44173 Query 47727 AATATTCATATCAAAATAAGGTGCA-GATTCCTCAACAAACTGACGGACAGAATATTGAT 47785 |||| | | || | | || | | | || ||||| | ||| | | | | Sbjct 44174 AATAGT-ACGTCCAGTCACCTTGAAAGCCTTTTCGACAAAGCTTCTGACTGTGTGTGTTT 44232 Query 47786 TTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCT 47845 || || || | |||||||| | ||||| ||||| || ||||| | ||||||| ||| Sbjct 44233 CACCAGTAGCCAAGACAAAATCTTGAGGTTGATCTTGCTGCAGCATGAGCCACATACCCT 44292 Query 47846 CGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAAC 47905 |||||||||| | ||||||||||| ||||| ||||||| ||| || ||||| | | Sbjct 44293 CGACATAATCACGAGCATGTCCCCAATCACGCTTAGCATCAATATTACCGAGATAAAGGC 44352 Query 47906 AGTCTTG-CTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 | ||||| | | || | ||| || | || | ||||||| || || || || Sbjct 44353 ACTCTTGACGTCCCAAGTG-GATGTCTGCAACAGCACGACTAATCTTTCGGGTAACGAAG 44411 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 || |||||| | || |||||||| || || |||||||| |||||||| |||| | Sbjct 44412 GTACGACCACGACGAGGCGATTCATGGTTGAAGAGAATACCGTTACAGGCAAACATGTTG 44471 Query 48025 TATGATTCACGATAGTT--CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAG 48082 ||||||||||| ||||| | || ||||| || ||||| || || || |||||||||| Sbjct 44472 TATGATTCACGGTAGTTGACCGTA--ATCCAATAGCCATAAAGCTTGGCTACACCATAAG 44529 Query 48083 GAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAA 48142 ||||||| |||||||| ||||| || || | || || || || || |||||||| | Sbjct 44530 GAGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGGGTGTTTCAACTACTTTACCATAGA 44589 Query 48143 GTTCACTGGTGGATGCTTGATAGATACGAACCCTATC--TTCCATCTCAAGCAAACGGAC 48200 ||||| || || |||||||||| |||||| | ||| || | | |||| ||||| Sbjct 44590 GTTCAGAAGTAGAAGCTTGATAGAAACGAACACGATCGGTTAAACCGCAAG--TACGGAT 44647 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 || ||||||| | || ||||| | || || | ||| ||||| || | ||| || Sbjct 44648 AGCATCAAGCAAACGAAGTGTGCCAAGAGCGTCGACGTCACCGGTATATTCTGACATGTC 44707 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTCA 48306 ||| || ||||| |||||| || || ||||||| |||| |||| Sbjct 44708 AAAAGAGACCTTGACATGAGATTGAGCTGCAAGATTGTAAACCTCA 44753 >seq107 Length=86639 Score = 255 bits (282), Expect = 8e-63 Identities = 520/761 (68%), Gaps = 21/761 (3%) Strand=Plus/Plus Query 47553 AACCAATTGTTTAAAAGAAGTTTTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGC 47612 |||||||| | ||||| | || | | ||| || |||| | | |||||||| | | Sbjct 57291 AACCAATTCGTCAAAAGTAACCTTGCGCTTCCAGCCTAATTCTGTGTTTGCCTTTGTAGG 57350 Query 47613 ATCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAGTCAATTCTGATA-- 47670 |||||| |||||| || ||||||||||||||||| || || | |||||| | | | Sbjct 57351 ATCACCCAATAAGAGATCAACTTCAGCAGGACGGAAGTACTTGGGGTCAATGCGCACACG 57410 Query 47671 -ACCGTTTTACCA---TCAGAATCAATACCAACTTCATCAAGACCAGAACCTTCCCATCT 47726 ||| || || |||| || |||||||||| | | || ||||||||| Sbjct 57411 GACC---TTGCCTGTTTCAGCGTCTTTACCAACTTCGTTCACGCCCTCACCTTCCCAAAC 57467 Query 47727 AATATTCATATCAAAATAAGGTGCA-GATTCCTCAACAAACTGACGGACAGAATATTGAT 47785 |||| | | || | | || | | | || ||||| | ||| | | | | Sbjct 57468 AATAGT-ACGTCCAGTCACCTTGAAAGCCTTTTCGACAAAGCTTCTGACTGTGTGTGTTT 57526 Query 47786 TTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCT 47845 || || || | || ||||| | ||| | ||||| || ||||| | ||||||| | | Sbjct 57527 CACCAGTAGCCAAGACGAAATCTTGAGGCTGATCTTGCTGTAGCATGAGCCACATACCTT 57586 Query 47846 CGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAAC 47905 |||||||||| | ||||||||||| ||||| ||||||| ||| || ||||| | | Sbjct 57587 CGACATAATCACGAGCATGTCCCCAATCACGCTTAGCATCAATATTACCGAGATAAAGGC 57646 Query 47906 AGTCTTG-CTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 | ||||| | | || | ||| || | || | |||||||| || || || || Sbjct 57647 ACTCTTGACGTCCCAAGTG-GATGTCTGCGACAGCACGAGTAATCTTTCGGGTAACGAAG 57705 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 || ||||| | || |||||||| || || ||||||||| |||||||| |||| | Sbjct 57706 GTACGGCCACGACGAGGTGATTCATGGTTGAAGAGAATACCATTACAGGCAAACATATTG 57765 Query 48025 TATGATTCACGATAGTT--CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAG 48082 ||||||||||| ||||| | || ||||| || ||||| || || || |||||||||| Sbjct 57766 TATGATTCACGGTAGTTGACCGTA--ATCCAATAACCATAAAGCTTGGCTACACCATAAG 57823 Query 48083 GAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAA 48142 | ||||| |||||||| ||||| || || | || || || || || |||||||| | Sbjct 57824 GGGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGGGTGTTTCAACTACTTTACCATAGA 57883 Query 48143 GTTCACTGGTGGATGCTTGATAGATACGAACCCTATC--TTCCATCTCAAGCAAACGGAC 48200 ||||| ||| || |||||||||| |||||| | ||| || | | |||| ||||| Sbjct 57884 GTTCAGAGGTAGAAGCTTGATAGAAACGAACACGATCGGTTAAACCACAAG--TACGGAT 57941 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 || ||||| | | || ||||| | || || | ||| ||||| || | ||| || Sbjct 57942 AGCATCAAGTAAACGAAGTGTGCCAAGAGCGTCGACGTCACCGGTATATTCTGACATGTC 58001 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAA 48301 ||| || ||||| |||||| || || ||||||| |||| Sbjct 58002 AAAAGAGACCTTGACATGAGATTGAGCTGCAAGATTGTAAA 58042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665481472771280