Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq291 111 2e-18 seq815 105 8e-17 seq650 98.7 1e-14 seq235 98.7 1e-14 seq862 91.5 2e-12 seq656 91.5 2e-12 seq328 89.7 6e-12 seq228 89.7 6e-12 seq67 86.0 8e-11 >seq291 Length=50391 Score = 111 bits (122), Expect = 2e-18 Identities = 181/258 (70%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||| || || ||||| | ||| || || ||||||||||||| | |||||||| Sbjct 27478 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 27419 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | ||||||||||| || | ||| | || || || | ||||| | ||||| Sbjct 27418 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 27359 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || ||||| || | ||||||||| | || || ||||||||| || ||||| || ||| Sbjct 27358 ATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 27299 Query 1630246 ATCGAGTCGGCCTTCAT-GTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||| || ||||||| || | ||||| || || || |||| || | | ||||| Sbjct 27298 ATCGAATCTTCCTTCATGGTGAGCAAGAAA-CAAGAAGACATTTGGGGACGAGGTGTGCC 27240 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || || || || || || Sbjct 27239 TGCATTAAATAGAGTAGG 27222 >seq815 Length=19846 Score = 105 bits (116), Expect = 8e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||| || || ||||| | ||| || || || |||||||||| | |||||||| Sbjct 17151 TGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAGTAATCCGTTGGAG 17210 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | ||||||||||| || | || | || || || | ||||| | ||||| Sbjct 17211 TAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 17270 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 |||||||| || | ||||||||| | || || ||||||||| || ||||| || ||| Sbjct 17271 ATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 17330 Query 1630246 ATCGAGTCGGCCTTCATG 1630263 ||||| || |||||||| Sbjct 17331 ATCGAATCTTCCTTCATG 17348 >seq650 Length=26201 Score = 98.7 bits (108), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 23814 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 23873 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| ||||| |||| || || | | Sbjct 23874 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGA 23933 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 23934 TATCATTGACAAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGT 23993 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | ||||||||||| | || ||||| Sbjct 23994 GGACTTGCTTCAAGACCTTGTAGATATAAGAGGAGTA 24030 >seq235 Length=58153 Score = 98.7 bits (108), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 28640 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 28699 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| ||||| |||| || || | | Sbjct 28700 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGA 28759 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 28760 TATCATTGACAAAGGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGT 28819 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | ||||||||||| | || ||||| Sbjct 28820 GGACTTGCTTCAAGACCTTGTAGATATAAGAGGAGTA 28856 Score = 98.7 bits (108), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 37964 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 37905 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| || ||| | || || || | | Sbjct 37904 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGA 37845 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || ||||||| Sbjct 37844 TATCATTGACAAAGGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGT 37785 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | |||||||||||| | || ||||| Sbjct 37784 GGACTTGCTTCAAGACCTTGTAGATGTAAGAGGAGTA 37748 >seq862 Length=17893 Score = 91.5 bits (100), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 17756 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 17697 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | | |||| ||| ||| |||| || | | | || || || || || || |||||| Sbjct 17696 GCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAGACGATCAGCAACGAATTCGATG 17637 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 ||||| ||||| | | | | ||||||||||||||| || || || || | || ||| | Sbjct 17636 TACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGACGGGAAGAGCATCCGTCAAA 17577 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || |||| || || ||| || || | |||||| Sbjct 17576 AATTCTTGTTCAATGCTGACAGCTTCCAAGATGAT 17542 Score = 87.8 bits (96), Expect = 2e-11 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 |||||| || |||| ||||| ||| ||||| || | | |||||||| || || || || Sbjct 17469 ACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCACGTTT 17410 Query 869239 CTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 |||||||||||||||| ||| || || ||||| ||||| || ||||| || |||| Sbjct 17409 TTTGAGCCAAAAGATGGAAGCA-AAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAA 17351 Query 869298 AGCCGATGAGCCGCTCGGCAAA 869319 || | | || || || ||||| Sbjct 17350 AGGCAACAAGACGTTCAGCAAA 17329 >seq656 Length=25916 Score = 91.5 bits (100), Expect = 2e-12 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 507 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 566 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | | |||| ||| ||| |||| || | | | ||||| ||||| || || |||||| Sbjct 567 GCCATGTAAATCTTGTCGAATCCAAGAGCAACCATAAGGCGATCGGCAACGAATTCGATG 626 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 || |||||||| | | | | |||||||||||||| || || || || | || ||| | Sbjct 627 TATTGGCACATCAAGGCAGAATTCATGCCGATGAGAGCAACGGGAAGAGCATCCGTCAAA 686 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || || | || || ||| || || | |||||| Sbjct 687 AATTCCTGTTCAATGCTGACAGCTTCCAAGATGAT 721 >seq328 Length=46411 Score = 89.7 bits (98), Expect = 6e-12 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1630076 AGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGACTCGCCGTTGG 1630135 |||| || ||||| |||||||| | |||||| || | || ||| ||||| ||||| | Sbjct 23628 AGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATGATGCCATTGGAGGTACCGTTTG 23569 Query 1630136 TGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGG 1630195 | || || | || | ||| | | | || | ||| || || |||| ||| | ||||| | Sbjct 23568 TTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAG 23509 Query 1630196 CCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGG 1630255 | ||||| ||||| | || ||| ||| || ||||||||||| ||||| ||| Sbjct 23508 CAGACTTTGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCT 23449 Query 1630256 CCTTCATGTCCACGAGAAAGCA 1630277 | ||||| | || || ||||| Sbjct 23448 CTTTCATTTGAACAAGGAAGCA 23427 >seq228 Length=59556 Score = 89.7 bits (98), Expect = 6e-12 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 1630076 AGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGACTCGCCGTTGG 1630135 |||| || ||||| |||||||| | |||||| || | | ||| ||||| |||||| | Sbjct 44933 AGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTGCCGTTTG 44874 Query 1630136 TGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGG 1630195 | || || | || | ||| | | | || | ||| || || |||| ||| | ||||| | Sbjct 44873 TTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAG 44814 Query 1630196 CCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGAT 1630247 | ||||||||||| | || ||| ||| || ||||||||||| ||||| Sbjct 44813 CAGACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGAT 44762 >seq67 Length=107840 Score = 86.0 bits (94), Expect = 8e-11 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | || ||||| || || || || || || || | || Sbjct 84185 GCTTGGCGAGTTCACCAGGAAGAATGAGGCGAACAGCAGTTTGAATTTCACGAGAAGAGA 84244 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| || ||| | || || || | | Sbjct 84245 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGA 84304 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||||||||| || || |||| Sbjct 84305 TATCATTGACAAAAGAGTTCAAGATGGACATGGCCTTGTTGGAGATACCAGTATCAGGGT 84364 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | |||||||||||| | || ||||| Sbjct 84365 GAACTTGCTTCAAGACCTTGTAGATGTAAGAGGAGTA 84401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107011671482618