Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq71 104 2e-17 seq769 93.3 3e-14 seq686 89.7 4e-13 >seq71 Length=102704 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || || ||| | |||||||| || ||||| | ||| || || Sbjct 21709 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCT 21650 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||| | ||| | || || || |||||| ||||| ||||| | || || Sbjct 21649 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGAC 21590 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||| |||||||| | ||| |||||||| || ||||||| | || || || ||| Sbjct 21589 CAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTAC 21530 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| ||||| |||||||| | ||| |||| Sbjct 21529 AACATCCAAAAGGAATCTACCCTTCACTTGGT 21498 >seq769 Length=21522 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| || | || || || || ||||| | ||| || || Sbjct 14069 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTTGAATCTTCT 14128 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || ||| ||| | | |||||||| |||||| ||||| ||||| | || |||||| Sbjct 14129 GACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 14188 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | ||| |||||||| || || |||| | || | || || ||| Sbjct 14189 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAAC 14248 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||||| |||||||| | ||| |||| Sbjct 14249 ATTCAAAAGGAATCTACTCTTCACTTGGT 14277 >seq686 Length=24674 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || || ||| | |||||||| || ||||| | ||| || || Sbjct 10546 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTTGAATCT 10605 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||| | ||| | || || || |||||| || || ||||| | || || Sbjct 10606 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGAC 10665 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 |||||| | || |||| || |||||||| || || || | | || || ||||| Sbjct 10666 CAACAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTAT 10725 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 |||||||||||||||||||| | ||| |||| Sbjct 10726 AACATTCAAAAAGAATCTACTCTTCACTTGGT 10757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833781038122