Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq650 154 2e-31 seq235 154 2e-31 seq291 131 3e-24 seq815 127 3e-23 seq67 127 3e-23 seq344 114 2e-19 seq862 107 3e-17 seq656 96.9 5e-14 seq228 96.9 5e-14 >seq650 Length=26201 Score = 154 bits (170), Expect = 2e-31 Identities = 190/257 (74%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 23775 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGGA 23834 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 23835 GGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 23893 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| ||||| |||| || || | || || |||||||| |||||| Sbjct 23894 GCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGATATCATTGACAAAAGAGTTC 23953 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 23954 AAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGTGGACTTGCTTCAAGACCTTG 24013 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 24014 TAGATATAAGAGGAGTA 24030 >seq235 Length=58153 Score = 154 bits (170), Expect = 2e-31 Identities = 190/257 (74%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 28601 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGGA 28660 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 28661 GGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 28719 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| ||||| |||| || || | || || |||||||| |||||| Sbjct 28720 GCAGCCAACTTGGAGGCTTCGGTAGCGATACGTTCAAAGATATCATTGACAAAGGAGTTC 28779 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 28780 AAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGTGGACTTGCTTCAAGACCTTG 28839 Query 1485709 TAAACAAAGGACGAGTA 1485725 || | | | || ||||| Sbjct 28840 TAGATATAAGAGGAGTA 28856 Score = 145 bits (160), Expect = 1e-28 Identities = 179/242 (74%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || |||||||||||| |||| ||||| || | | Sbjct 38003 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACGGCGTGCTTGGCGAGTTCACCAGGGA 37944 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| || || || ||||| ||||| || || | ||| ||| |||||||| || Sbjct 37943 GGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 37885 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || ||| | || || || | || || |||||||| |||||| Sbjct 37884 GCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGATATCATTGACAAAGGAGTTC 37825 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || |||||||| || ||||| | |||||| Sbjct 37824 AAGATGGACATGGCCTTGTTGGAGATACCGGTATCGGGGTGGACTTGCTTCAAGACCTTG 37765 Query 1485709 TA 1485710 || Sbjct 37764 TA 37763 >seq291 Length=50391 Score = 131 bits (144), Expect = 3e-24 Identities = 183/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || |||||||| || ||||| | ||| || || ||||||||||||| | |||||||| Sbjct 27478 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 27419 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | ||||||||||| || | ||| | || || || | ||||| | ||||| Sbjct 27418 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 27359 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| || | ||||||||| | || || |||| |||||||| ||||| || ||| Sbjct 27358 ATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 27299 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||| || |||||||| | || || || || || |||| || || | ||||| Sbjct 27298 ATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCT 27239 Query 2073781 GCATTGAAGAGCGTGGG 2073797 ||||| || || || || Sbjct 27238 GCATTAAATAGAGTAGG 27222 >seq815 Length=19846 Score = 127 bits (140), Expect = 3e-23 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || |||||||| || ||||| | ||| || || || |||||||||| | |||||||| Sbjct 17151 TGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAGTAATCCGTTGGAG 17210 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 | ||||||||||| || | || | || || || | ||||| | ||||| Sbjct 17211 TAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 17270 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 |||||||| || | ||||||||| | || || |||| |||||||| ||||| || ||| Sbjct 17271 ATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 17330 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 ||||| || |||||||| | || ||||| || || |||| || || | ||||| Sbjct 17331 ATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGGTGTGCCT 17390 Query 2073781 GCATTGAA 2073788 ||||| || Sbjct 17391 GCATTAAA 17398 >seq67 Length=107840 Score = 127 bits (140), Expect = 3e-23 Identities = 175/242 (72%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||||||||| || ||||| |||||| |||| ||||| || | | Sbjct 84146 TGTACTTGGTGACAGCCTTGGTACCTTCAGAGACAGCGTGCTTGGCGAGTTCACCAGGAA 84205 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || || || || || || || | ||| ||| |||||||| || Sbjct 84206 GAATGAGGCGAACAGCAGTTTGAATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 84264 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || ||| | || || || | || || |||||||| |||||| Sbjct 84265 GCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGATATCATTGACAAAAGAGTTC 84324 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || || ||||| || ||||| | |||||| Sbjct 84325 AAGATGGACATGGCCTTGTTGGAGATACCAGTATCAGGGTGAACTTGCTTCAAGACCTTG 84384 Query 1485709 TA 1485710 || Sbjct 84385 TA 84386 >seq344 Length=45429 Score = 114 bits (126), Expect = 2e-19 Identities = 172/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| ||||||||||| || ||||| |||||| |||| ||||| || | | Sbjct 44814 TGTATTTGGTGACAGCCTTGGTACCTTCAGAGACAGCGTGCTTGGCGAGTTCACCAGGAA 44755 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || || || || || || || | ||| ||| |||||||| || Sbjct 44754 GAATGAGACGAACAGCAGTTTGAATTTCACGAGAAGAGATGGTGGAACGCTTGTT-GTAA 44696 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || |||| | ||| || || | || || || | || || |||||||| |||||| Sbjct 44695 GCAGCCAACTTGGAGGCTTCAGTAGCAATACGTTCAAAGATATCATTGACAAAAGAGTTC 44636 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | ||||||||||| || || ||||| || ||||| | |||||| Sbjct 44635 AAGATAGACATGGCCTTGTTGGAGATACCAGTATCAGGGTGAACTTGCTTTAAGACCTTG 44576 Query 1485709 TA 1485710 || Sbjct 44575 TA 44574 >seq862 Length=17893 Score = 107 bits (118), Expect = 3e-17 Identities = 224/333 (67%), Gaps = 12/333 (4%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 |||||| || |||| ||||||||| ||||| || | |||||||| || || || || Sbjct 17469 ACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCACGTTT 17410 Query 794400 CTTGAGCCAAAAGATG---GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||||||||| ||| || || || ||||| ||||| || ||||| || || Sbjct 17409 TTTGAGCCAAAAGATGGAAGCAAAGGAA---CCAGAGAAGAAGATACCTTCGACAGCAGC 17353 Query 794457 AAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGC 794516 |||| | || || || || ||||||| || | | ||||| || | || Sbjct 17352 AAAGGCAACAAGACGTTCAGCAAAAG------AACCGTTAGAGGAAATCCATTTGAAGGC 17299 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576 ||| || |||||| || | | | || | ||||| || || |||||| || || Sbjct 17298 CCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTT 17239 Query 794577 CTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 ||| ||| |||| || ||||| || | || ||| || |||| ||| || || Sbjct 17238 CTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATATT 17179 Query 794637 TTCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 ||| || ||| || |||||||| || || || Sbjct 17178 TTCAATCATGATTTGAAAGCCATAGAAACATTT 17146 Score = 98.7 bits (108), Expect = 2e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 17756 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 17697 Query 793986 GTCAGGTAGTGCTTCTCGCACCC--GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAA 794043 | || ||| ||| ||| | || |||| || || | || || || || |||||||| | Sbjct 17696 GCCATGTAAATCTTGTCGAATCCAAGAGCAAC-CATG-AGACGATCAGCAACGAATTCGA 17639 Query 794044 TGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGA 794103 ||||||| ||||| | ||| | ||||||||||||||| || ||||| || | || | | Sbjct 17638 TGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGACGGGAAGAGCATCCGTCA 17579 Query 794104 CAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 ||| |||| || || ||| || || | |||||| Sbjct 17578 AAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGAT 17542 >seq656 Length=25916 Score = 96.9 bits (106), Expect = 5e-14 Identities = 221/332 (67%), Gaps = 12/332 (4%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || |||| ||||||||| ||||| || | || ||||| | || || ||| Sbjct 795 CCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCACGTTTC 854 Query 794401 TTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 ||||||||||| || ||| || || || ||||| ||||| || ||||| || ||| Sbjct 855 TTGAGCCAAAAAATAGAAGCAAAGGAA---CCAGAGAAGAAGATACCTTCGACAGCAGCA 911 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 ||| | || || ||||| ||||||| || | | |||||||| | ||| Sbjct 912 AAGGCAACAAGACGCTCAGCAAAAG------AACCGTTAGAGGAAATCCACTTGAAGGCC 965 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || |||||| | | | |||| | ||||| || || ||| || || ||| Sbjct 966 CAATCAGCCTTTCTTTTGATACAGGGGATAGTGTCAATAGCAGAAAATAGCATTTCTTTC 1025 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || || |||| || ||||| || | || ||| || |||| ||| |||||| Sbjct 1026 TCTTGATTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATGTTT 1085 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAGTT 794669 || || ||| || |||||||| || || || Sbjct 1086 TCAATCATGATTTGAAAGCCATAGAAACATTT 1117 Score = 95.1 bits (104), Expect = 2e-13 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 507 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 566 Query 793986 GTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || ||| ||| ||| | || || | | | ||||| ||||| |||||||| ||| Sbjct 567 GCCATGTAAATCTTGTCGAATCCAAGAGCAACCATAAGGCGATCGGCAACGAATTCGATG 626 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 || |||||||| | ||| | |||||||||||||| || ||||| || | || | | | Sbjct 627 TATTGGCACATCAAGGCAGAATTCATGCCGATGAGAGCAACGGGAAGAGCATCCGTCAAA 686 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 || || | || || ||| || || | |||||| Sbjct 687 AATTCCTGTTCAATGCTGACAGCTTCCAAGATGAT 721 >seq228 Length=59556 Score = 96.9 bits (106), Expect = 5e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 2073547 ACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGACTCGCCG 2073606 ||| |||| || ||||| |||||||| | |||||| || | || ||| ||||| |||| Sbjct 44937 ACAAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTGCCG 44878 Query 2073607 TTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCG 2073666 || || || || | || | ||| ||| | || | ||| || || |||| ||| | ||| Sbjct 44877 TTTGTTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCG 44818 Query 2073667 CCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCGAT 2073722 || || | ||||||||| | || ||| | | | || ||||||||||| ||||| Sbjct 44817 CCAGCAGACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGAT 44762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916081093932206