Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq243 107 1e-18 seq769 105 4e-18 >seq243 Length=56764 Score = 107 bits (118), Expect = 1e-18 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| |||| || ||||| || ||||||||||| |||| | || |||| Sbjct 37866 AGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCT 37925 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| || ||||| || || | || | || |||||||| Sbjct 37926 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 37985 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | ||||||||||| || || | ||||| ||| | |||||| || | || || Sbjct 37986 TGAATTTTTTGTTTTAC--AT--TGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAAT 38041 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981 ||||||| || || ||||| |||||||| ||||||||| Sbjct 38042 CATCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATA 38081 >seq769 Length=21522 Score = 105 bits (116), Expect = 4e-18 Identities = 156/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||| |||||||||||||| |||| | || |||| Sbjct 14280 AGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCT 14221 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| || ||||| || || | || | || |||||||| Sbjct 14220 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 14161 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || |||||||| || || | ||||| ||| | || || || | || || Sbjct 14160 TGAATCTTTTGTTTTAC--AT--TGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAAT 14105 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||||||| || || ||||| |||||||| |||||||| Sbjct 14104 TGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGAT 14066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686631581926