Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq453 93.3 5e-14 >seq453 Length=36563 Score = 93.3 bits (102), Expect = 5e-14 Identities = 176/259 (68%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 168526 AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 168585 ||||||| | ||| | || ||||| || | ||||| || ||| ||| | | || Sbjct 18985 AAGAACTGCTTTGGTTCATTAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATG 19044 Query 168586 TTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAA 168645 | || ||||| | | || |||||||| |||| | | || | |||||||| | Sbjct 19045 TCAAGATTTGGGATGGCAACGGTTCTCGCGAATATCTCGACAAGTTAGGTTTTACTCACC 19104 Query 168646 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 168705 | ||||||||| | || ||| | || ||||||||||||||||| || || ||| Sbjct 19105 GTCGTGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAAT 19164 Query 168706 ATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAA 168765 | |||| |||||||| ||||| || || ||||| | || |||||| ||| || Sbjct 19165 ACGTTGATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCG 19224 Query 168766 ATACTTTACACAACAATCC 168784 | ||| || | |||||||| Sbjct 19225 ACACTATAAAAAACAATCC 19243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635165261675120