Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq453 107 3e-18 seq49 100 4e-16 >seq453 Length=36563 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 180551 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATT 180610 ||||||||| | |||||| | || ||||||||||||||||| || || |||| || Sbjct 19110 GAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGTT 19169 Query 180611 GACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACT 180670 || |||||||| | |||| |||||||| || || |||||| ||||| || || ||| Sbjct 19170 GATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCGACACT 19229 Query 180671 ATAAAAAATAATCC 180684 |||||||| ||||| Sbjct 19230 ATAAAAAACAATCC 19243 >seq49 Length=122128 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 180551 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATT 180610 ||||| ||| | |||||| | || ||||||||||||||||| || || |||| || Sbjct 120094 GAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGTT 120153 Query 180611 GACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACT 180670 || |||||||| | |||| || ||||| || || |||||| ||||| || || ||| Sbjct 120154 GATTGTGATACTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTGACACT 120213 Query 180671 ATAAAAAATAATCCC 180685 |||||||| |||||| Sbjct 120214 ATAAAAAACAATCCC 120228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655267271186000