Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq453 98.7 1e-15 seq49 89.7 6e-13 >seq453 Length=36563 Score = 98.7 bits (108), Expect = 1e-15 Identities = 177/259 (68%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 171611 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 171670 ||||||| | ||| | |||||||| || | ||||| || ||| ||| | | || Sbjct 18985 AAGAACTGCTTTGGTTCATTAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATG 19044 Query 171671 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 171730 | || ||||| ||| || |||||||| |||| | | || | || |||||| | Sbjct 19045 TCAAGATTTGGGATGGCAACGGTTCTCGCGAATATCTCGACAAGTTAGGTTTTACTCACC 19104 Query 171731 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 171790 | ||||||||| | || ||| | || ||||||||||||||||| || || ||| Sbjct 19105 GTCGTGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAAT 19164 Query 171791 ATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 171850 | | || ||| |||| ||||| ||||| ||||| | || |||||| ||| || Sbjct 19165 ACGTTGATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCG 19224 Query 171851 ATACTTTACAAAACAACCC 171869 | ||| || ||||||| || Sbjct 19225 ACACTATAAAAAACAATCC 19243 >seq49 Length=122128 Score = 89.7 bits (98), Expect = 6e-13 Identities = 175/259 (68%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 171611 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 171670 |||| || | ||| | |||||||| || | ||||| || ||| ||| | | | Sbjct 119969 AAGAGCTGCTTTGGTTCATTAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAACG 120028 Query 171671 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 171730 | || ||||| ||| || |||||||| |||| | | || | || ||||| | Sbjct 120029 TCAAGATTTGGGATGGCAACGGTTCTCGCGAATATCTCGACAAGTTGGGTCTTACTCACC 120088 Query 171731 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 171790 | ||||| ||| | || ||| | || ||||||||||||||||| || || ||| Sbjct 120089 GTCGTGAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAAT 120148 Query 171791 ATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAACTATTA 171850 | | || ||| |||| ||||| ||||||||||| | || |||||| ||| ||| Sbjct 120149 ACGTTGATTGTGATACTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTG 120208 Query 171851 ATACTTTACAAAACAACCC 171869 | ||| || ||||||| || Sbjct 120209 ACACTATAAAAAACAATCC 120227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628518990781440