Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq71 111 4e-19 seq686 105 2e-17 seq815 102 2e-16 seq769 102 2e-16 seq243 95.1 3e-14 seq80 89.7 1e-12 >seq71 Length=102704 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || ||||| ||||| ||||| ||| |||||| | ||||| Sbjct 21691 AAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCTTCTGATAGTATCGAAAAT 21632 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||||||||| || ||||| || || ||| || ||||||||||| Sbjct 21631 GTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCAACAGAGACTTATCTTT 21572 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || | || ||||| | |||||| || |||||| |||| || || ||| Sbjct 21571 GCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTACAACATCCAAAAGGAATCT 21512 Query 206365 ACTCTTCAC 206373 || |||||| Sbjct 21511 ACCCTTCAC 21503 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || ||||| || || || || || ||||| || || ||||| Sbjct 21475 CAAATCTTTGTCAAGACTCTCACTGGTAAGACCATTACCTTGGAGGTTGAGTCCTCTGAT 21416 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | ||| || ||||||||||| ||||| || ||||| ||| || ||| ||| Sbjct 21415 AGTATTGAAAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCTCCTGACCAACAA 21356 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || || |||||||| |||||| | || ||||| | |||||| || |||||| || Sbjct 21355 CGTCTCATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGTACTTTGAGTGACTACAACATC 21296 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || || ||||| |||||| | ||| | | ||||| Sbjct 21295 CAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCG 21258 >seq686 Length=24674 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || ||||| ||||| ||| |||||| | ||||| Sbjct 10564 AAGACTCTTACCGGCAAGACAATTACTTTAGAAGTTGAATCTTCTGATAGTATCGAAAAT 10623 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||||||||| || ||||| || || ||| ||| | || || ||| Sbjct 10624 GTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGACCAACAACGTCTCATTTTC 10683 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || | ||||| || | |||||| ||||| ||| | || ||||| ||| Sbjct 10684 GCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTATAACATTCAAAAAGAATCT 10743 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||| | ||| | | ||||| Sbjct 10744 ACTCTTCACTTGGTTCTTCGTCTTCG 10769 >seq815 Length=19846 Score = 102 bits (112), Expect = 2e-16 Identities = 173/248 (70%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || ||||| |||| ||||| || |||| ||||| |||||| |||||||| | | Sbjct 16785 GCATCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATAC 16844 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | ||| || || | || ||| ||||||||||| ||||||| | |||||| Sbjct 16845 CACAGCTTTTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAG 16904 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | | || || | || | ||||| | | || ||||| || || |||||||| Sbjct 16905 AGAGCAACAAACTCATCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAAC 16964 Query 173287 AGACTCCAATTTCCATCGGTCTC-GACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGC 173345 ||| ||||| || | ||||| ||| | || ||||||||| || | | |||| | || Sbjct 16965 AGAGACCAATCACC-GCCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGC 17023 Query 173346 GTAGAACA 173353 ||||||| Sbjct 17024 ATAGAACA 17031 >seq769 Length=21522 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || ||||| || || ||||| ||||| ||| ||||||| Sbjct 14072 CAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTTGAATCTTCTGAC 14131 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| ||||| |||||||||||||| || ||||| ||| || || ||| Sbjct 14132 ACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAA 14191 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || || || | |||||||| | || | ||| || ||| | Sbjct 14192 CGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAACATT 14251 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || || |||||||||||| Sbjct 14252 CAAAAGGAATCTACTCTTCAC 14272 >seq243 Length=56764 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || || || ||||| | ||| ||||| ||||| || ||||||| Sbjct 38074 CAAATCTTTGTCAAGACACTTACTGGAAAGATGATTACTTTAGAAGTCGAGTCTTCTGAC 38015 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| ||||| ||||| |||||||| || ||||| ||| || || ||| Sbjct 38014 ACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAA 37955 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || || || | |||||||| | || | ||| || ||| || Sbjct 37954 CGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAACATC 37895 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || || ||||||||||| Sbjct 37894 CAAAAGGAATCTACTCTTCA 37875 >seq80 Length=97372 Score = 89.7 bits (98), Expect = 1e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||| ||||| | || || ||||||||||||||||| || ||||| ||| || Sbjct 13820 AGTTCCGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 13761 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| ||| | |||||||| ||||| || || | ||||| || | || ||| ||| Sbjct 13760 GACCAACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGCGAC 13701 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||| |||| || || |||||||| ||| | ||| | | ||||| Sbjct 13700 TATAACATCCAAAAGGAATCTACTCTCCACTTAGTTCTCCGTCTTCG 13654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181797269209234