Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq355 113 1e-19 seq205 104 5e-17 >seq355 Length=43543 Score = 113 bits (124), Expect = 1e-19 Identities = 191/275 (69%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 299037 GGTGCATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTG 299096 || || || | ||||||| | |||||||||||||||||||||||||| || | | | Sbjct 32619 GGCGCTTTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTC 32678 Query 299097 CTAAAAGAACTAAAGAAACGTGAAAA---TACTATTGTTTTCATTGATGAAATTCATATT 299153 | |||||| | ||| || |||| | || |||| | || ||||||||||| || | | Sbjct 32679 TTGAAAGAAGTCAAGGAATCTGAAGAAGGTATTATTTTGTTTATTGATGAAATCCACACT 32738 Query 299154 ATGGTTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCCA 299213 | |||| || ||| | || | |||||||||||| |||| |||| ||||| Sbjct 32739 GTTCTTGGTGCCGGT---AAAGGTGAGGGTTCTATGGACGCTGCCAATCTGCTGAAGCCT 32795 Query 299214 GCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAACAACATATGATGAATATCGTAAA 299273 || | || ||||| | || ||||| || |||||| | |||||||||| || Sbjct 32796 ATGCTGGCTCGCGGTGAATTGCGATGCATTGGCGCTACAACACTTACTGAATATCGTGAA 32855 Query 299274 AATATCGAGAAAGATAGTGCATTAACTCGTCGTTT 299308 ||||| |||||| |||||| |||||||| Sbjct 32856 ---ATCGAAAAAGATCCTGCATTCGAGCGTCGTTT 32887 >seq205 Length=64096 Score = 104 bits (114), Expect = 5e-17 Identities = 189/275 (69%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 299037 GGTGCATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTG 299096 || || || | ||||||| | |||||||||||||||||||||||||| || | | | Sbjct 52613 GGCGCCTTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTC 52672 Query 299097 CTAAAAGAACTAAAGAAACGTGAAAA---TACTATTGTTTTCATTGATGAAATTCATATT 299153 | |||||| | ||| || |||| | || ||| | || ||||||||||| || | | Sbjct 52673 TTGAAAGAAGTTAAGGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACT 52732 Query 299154 ATGGTTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCCA 299213 | |||| || ||| | || | ||||||||||| |||| |||| || || Sbjct 52733 GTTCTTGGTGCCGGT---AAAGGTGAGGGTTCTATGGATGCTGCCAATCTGCTGAAACCT 52789 Query 299214 GCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAACAACATATGATGAATATCGTAAA 299273 || | ||||||||| | || || || || |||||| | |||||||||| || Sbjct 52790 ATGCTGGCTCGTGGTGAGCTGCGATGCATCGGCGCTACAACACTTACTGAATATCGTGAA 52849 Query 299274 AATATCGAGAAAGATAGTGCATTAACTCGTCGTTT 299308 ||||| |||||| |||||| |||||||| Sbjct 52850 ---ATCGAAAAAGATCCTGCATTCGAGCGTCGTTT 52881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115148996244426