Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq815 127 3e-23 seq291 125 1e-22 seq650 122 1e-21 seq235 122 1e-21 seq67 89.7 7e-12 >seq815 Length=19846 Score = 127 bits (140), Expect = 3e-23 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 259934 TTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCC 259993 |||||||| ||||| || || || || | || || ||||| || | |||||||| Sbjct 17398 TTTAATGCAGGCACACCTCGTCCCCAAATGTCTTCTTGCTTCTTGCTCACCATGAAGGAA 17339 Query 259994 GATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCC 260053 ||||||||||| || |||||||| |||||||| || || | ||||||||| | || Sbjct 17338 GATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCA 17279 Query 260054 GGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACC 260113 |||||||| || || | ||||| | || || || | || | || |||||| Sbjct 17278 GGCGGCATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCATATATTGCCGGCACC 17219 Query 260114 AACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTAC 260173 ||||| | |||||||| | |||||||||| || ||||| ||| | ||||| || || Sbjct 17218 AACGGTTACTCCAACGGATTACTGCCCATGCTACGTGTTTTCAACAATACGGCTCGTTAT 17159 Query 260174 GTCGACCA 260181 ||||| || Sbjct 17158 GTCGATCA 17151 >seq291 Length=50391 Score = 125 bits (138), Expect = 1e-22 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || || |||||||| ||||| || || || || | || || || || || | | Sbjct 27222 CCTACTCTATTTAATGCAGGCACACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCTCACC 27281 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||||||||||| || |||||||| |||||||| || || | |||||| Sbjct 27282 ATGAAGGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCC 27341 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || ||||| || || || | ||||| | || || || | ||| | Sbjct 27342 AAGACAGCAGGCGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCATACATT 27401 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || ||||||||||| | |||||||| | |||||||||| || ||||| ||| | ||| Sbjct 27402 GCCGGCACCAACGGTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACAATACG 27461 Query 260165 GCGCGCTACGTCGACCA 260181 || || || ||||| || Sbjct 27462 GCTCGTTATGTCGATCA 27478 >seq650 Length=26201 Score = 122 bits (134), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||||| | ||||| || |||||| |||| | ||| Sbjct 24030 TACTCCTCTTATATCTACAAGGTCTTGAAGCAAGTCCACCCCGATACCGGT-----ATC- 23977 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || |||| Sbjct 23976 TCCAACAAGGCCATGTCCATCTTGAACTCTTTTGTCAATGATATCTTTGAACGTATCGCT 23917 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||| ||| |||| | ||||||||| ||| ||| | || || ||| Sbjct 23916 ACCGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 23857 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || ||| | | || ||||| |||| |||||||||||| || || Sbjct 23856 CAAACCGCTGTTCGTCTCATCCTCCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 23797 Query 725139 ACCA 725142 |||| Sbjct 23796 ACCA 23793 >seq235 Length=58153 Score = 122 bits (134), Expect = 1e-21 Identities = 174/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | |||||||||||| | ||||| || |||||| |||| | ||| Sbjct 28856 TACTCCTCTTATATCTACAAGGTCTTGAAGCAAGTCCACCCCGATACCGGT-----ATC- 28803 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || |||| Sbjct 28802 TCCAACAAGGCCATGTCCATCTTGAACTCCTTTGTCAATGATATCTTTGAACGTATCGCT 28743 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 ||||| ||| |||| | ||||||||| ||| ||| | || || ||| Sbjct 28742 ACCGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 28683 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || ||| | | || ||||| |||| |||||||||||| || || Sbjct 28682 CAAACCGCTGTTCGTCTCATCCTCCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 28623 Query 725139 ACCA 725142 |||| Sbjct 28622 ACCA 28619 Score = 113 bits (124), Expect = 6e-19 Identities = 172/244 (70%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| | ||||| || |||||| |||| | ||| Sbjct 37748 TACTCCTCTTACATCTACAAGGTCTTGAAGCAAGTCCACCCCGATACCGGT-----ATC- 37801 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || || | | Sbjct 37802 TCCAACAAGGCCATGTCCATCTTGAACTCCTTTGTCAATGATATCTTTGAACGTATTGCC 37861 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || || ||| |||| | ||||||||| ||| ||| | || || ||| Sbjct 37862 ACTGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATC 37921 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || ||||| || || || ||| | | || ||||| |||| |||||||||||| || || Sbjct 37922 CAAACCGCTGTTCGTCTCATCCTCCCTGGTGAACTCGCCAAGCACGCCGTCTCTGAAGGT 37981 Query 725139 ACCA 725142 |||| Sbjct 37982 ACCA 37985 >seq67 Length=107840 Score = 89.7 bits (98), Expect = 7e-12 Identities = 168/244 (69%), Gaps = 6/244 (2%) Strand=Plus/Minus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||| | ||||| || ||||| || ||| || | Sbjct 84401 TACTCCTCTTACATCTACAAGGTCTTGAAGCAAGTTCACCCTGATAC---TGG--TAT-C 84348 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||||||| ||||||| ||| ||||||| |||||||| || || | || || || | | Sbjct 84347 TCCAACAAGGCCATGTCCATCTTGAACTCTTTTGTCAATGATATCTTTGAACGTATTGCC 84288 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || || ||| |||| | ||||||||| ||| ||| | || || || Sbjct 84287 ACTGAAGCCTCCAAGTTGGCTGCTTACAACAAGCGTTCCACCATCTCTTCTCGTGAAATT 84228 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 || || || || ||||| || | | || ||||| |||| |||||| ||||| || || Sbjct 84227 CAAACTGCTGTTCGCCTCATTCTTCCTGGTGAACTCGCCAAGCACGCTGTCTCTGAAGGT 84168 Query 725139 ACCA 725142 |||| Sbjct 84167 ACCA 84164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177661313843748