Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq769 138 1e-27 seq243 123 3e-23 seq686 122 9e-23 seq71 116 4e-21 seq80 104 2e-17 seq439 98.7 1e-15 seq175 98.7 1e-15 seq291 89.7 5e-13 seq228 86.0 6e-12 seq815 84.2 2e-11 >seq769 Length=21522 Score = 138 bits (152), Expect = 1e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || || ||||||||||||||||| ||||||| Sbjct 14295 CCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTT 14236 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || ||||| ||||| || ||||| || | ||| || ||||| || || Sbjct 14235 AGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 14176 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || |||||||| |||||||| || ||| | ||||| || ||||| || Sbjct 14175 ATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACT 14116 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTT 134722 || | |||||| || || || || | || || || || |||||||| ||| ||| Sbjct 14115 TCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATGTATTT 14060 >seq243 Length=56764 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||||||||| ||||| ||||||| | ||| || || ||||| ||| Sbjct 37875 TGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCGAGTTGT 37934 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | ||| || ||||| || || || ||||| || |||||||||||| Sbjct 37935 TTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATTTTT 37994 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| || ||| | ||||| || || || || || | |||||| | || || || Sbjct 37995 TGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATCTTTCCAGTA 38054 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 38055 AGTGTCTTGACAAAGATTTGCAT 38077 >seq686 Length=24674 Score = 122 bits (134), Expect = 9e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||| ||||||||||| || || | | || || ||| ||||| || Sbjct 10752 GTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTACGACCGTCTTCGAGTTG 10693 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || || || || || || ||||| || |||||||| || Sbjct 10692 TTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCTTCCTTATCTTGAATCTT 10633 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| ||||| || | | || || ||||| || || | |||||| || || ||||| Sbjct 10632 TTGCTTGACATTTTCGATACTATCAGAAGATTCAACTTCTAAAGTAATTGTCTTGCCGGT 10573 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTT 134716 | ||| || ||||| ||||||||||| Sbjct 10572 AAGAGTCTTTACGAAGATTTGCATTTT 10546 >seq71 Length=102704 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| ||||||||||| | | || || || || || || Sbjct 21503 GTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTG 21562 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | | ||| || || || || || ||||| || |||||||| || Sbjct 21563 TTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTT 21622 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| ||||| || | | || || ||||| || || | |||||| || || ||||| Sbjct 21623 TTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGT 21682 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTT 134716 | ||| || ||||| ||||||||||| Sbjct 21683 AAGAGTCTTTACGAAGATTTGCATTTT 21709 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| ||||||||||| | | || | || || ||||| Sbjct 21275 GTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGGCCATCCTCAAGCTG 21334 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || ||||| | ||| || || || || || || ||||| || ||||| || || Sbjct 21335 CTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACCTTCCTTATCTTGGATCTT 21394 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||| ||||| || | | || || || || || || | |||||||| ||||| || Sbjct 21395 TTGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCAAGGTAATGGTCTTACCAGT 21454 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | ||| || || || |||||||| Sbjct 21455 GAGAGTCTTGACAAAGATTTGCAT 21478 >seq80 Length=97372 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || ||||||||||| ||||| ||||||| | ||| || ||| ||||| || Sbjct 13671 GTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAAGGTACGACCGTCTTCGAGTTG 13730 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || ||||| || | ||| || || || || || || ||||| || |||||||| || Sbjct 13731 TTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATCTT 13790 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | |||||||| Sbjct 13791 TTGCTTGACGTTGTCAATGGTGTCGGA 13817 >seq439 Length=37054 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||||||||||||||| || | | ||| || ||| ||||| || Sbjct 23577 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTG 23518 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || ||||| || || || ||||| || ||||| || || Sbjct 23517 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTT 23458 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | ||||| || Sbjct 23457 TTGCTTGACATTGTCAATGGTGTCAGA 23431 >seq175 Length=68572 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || |||||||||||||||||||| || | | ||| || ||| ||||| || Sbjct 14527 GTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCGAGTTG 14468 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || ||||| | ||| || ||||| || || || ||||| || ||||| || || Sbjct 14467 TTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTT 14408 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGA 134656 ||| ||||| ||| | ||||| || Sbjct 14407 TTGCTTGACATTGTCAATGGTGTCAGA 14381 >seq291 Length=50391 Score = 89.7 bits (98), Expect = 5e-13 Identities = 356/558 (64%), Gaps = 2/558 (0%) Strand=Plus/Plus Query 8719 TACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAAT 8778 |||||| | || | |||||||||| | || || |||||||||||||||||||| Sbjct 28272 TACGAAACCTATGAAGGCAGCCCTGTATCCAAGGGTATCCTGCAATACGACATGTGGAAT 28331 Query 8779 GTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGT 8838 ||||| || ||| | | ||| | ||| || | || || ||||| | ||| Sbjct 28332 GTCACACCTACCAATCTTTGGGACTGGGCCGCACTCAAGGAAAAGATTGCCAAGCATGGT 28391 Query 8839 TTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGA 8898 | || || || ||| |||| ||| ||||| || ||| | ||| ||||||| | || Sbjct 28392 GTCCGTAACTCTCTGCTGGTTGCTCCTATGCCTACTGCCTCCACTTCTCAAATGCTCGGT 28451 Query 8899 AACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGC 8958 ||| |||| ||||| || | ||| |||| | ||| | || ||| | | || Sbjct 28452 TTCAATGAATGTTTTGAACCTTACACATCCAACTTTTACACCCGTCGTGTGCTCTCAGGT 28511 Query 8959 GATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAAGCGGGCGTTTACGAC 9018 || | | |||| | |||| | || | || || | | || ||| | | | Sbjct 28512 GAATATCAAATGGTCAATCCTTGGTTACTTCGTGATCTAGTTGATATGGGTCTCTGGAAT 28571 Query 9019 GACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACATTGACGCGGTG 9078 ||| | || || ||| ||| | | || |||||||| | | | Sbjct 28572 GACGATGTGAAGAATATGATCATGGCTGACGGAGGATCTATTCAGAACGTGCCCAGCATC 28631 Query 9079 CCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATC 9138 |||||| || | ||||| || || || ||||| |||||||| ||| | || | || Sbjct 28632 CCTCAAAACTTGAAAGACCTCTACAAGACCGTCTGGGAAATCTCTCAACGTACTATCATT 28691 Query 9139 GGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTA 9198 | ||||||||| ||| | || || | |||||| || |||||| ||| ||| | || | Sbjct 28692 GACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAGTCAAAGTTTGAACATCTTTATG 28751 Query 9199 GCCGCACC-AACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTT 9257 || | ||| ||||| | | | | |||| || || | || |||| ||| ||| || Sbjct 28752 GCTGAACCCAACTTTGG-TAAGCTCACCAGTATGCACTTTTATGGTTGGCAAAAGGGATT 28810 Query 9258 AAAAACAGGCATGTACTA 9275 ||| ||||||||||| || Sbjct 28811 AAAGACAGGCATGTATTA 28828 >seq228 Length=59556 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 9091 AAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTGCG 9150 ||| |||| || ||||| || ||||| || ||||| || | || | |||||| || Sbjct 46322 AAAAAGCTATACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGCCGCT 46381 Query 9151 GATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA-C 9209 |||||||| |||||||| || || ||||||| | || |||| |||| ||||| | Sbjct 46382 GATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACCAAAC 46441 Query 9210 TTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCAT 9269 || || | || || || || | || | ||||| | ||| ||||| || ||||| Sbjct 46442 TTTGGCAA-GCTGACCTCTATGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTGGCAT 46500 Query 9270 GTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAA 9308 |||||||||| | | | ||| || | ||| | ||||| Sbjct 46501 GTACTATTTGAGATCTAGACCTGCAGTTGATGCAATCAA 46539 >seq815 Length=19846 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 9079 CCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATC 9138 |||||| || | ||||| || || || ||||| |||||||| ||| | || | || Sbjct 15997 CCTCAAAACTTGAAAGATCTCTACAAGACCGTCTGGGAAATCTCTCAACGTACCATCATT 15938 Query 9139 GGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTA 9198 | ||||||||| ||| | || || | |||||| || |||||| ||| ||| | || | Sbjct 15937 GACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAGTCAAAGTTTGAACATCTTTATG 15878 Query 9199 GCCGCACC-AACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTT 9257 || | ||| ||||| | | | | |||| || || | || |||| ||| ||| || Sbjct 15877 GCTGAACCCAACTTTGG-TAAGCTCACCAGTATGCACTTTTATGGTTGGCAAAAGGGATT 15819 Query 9258 AAAAACAGGCATGTACTA 9275 ||| ||||||||||| || Sbjct 15818 AAAGACAGGCATGTATTA 15801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505388582636080