Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq107 140 5e-28 seq145 127 3e-24 >seq107 Length=86639 Score = 140 bits (154), Expect = 5e-28 Identities = 256/373 (69%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| | || ||| | || ||| |||| || || || ||| ||| | ||||| ||| Sbjct 57929 GGTTTAACCGATCGTGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTA 57870 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 || ||||| || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 57869 GTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCC 57810 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 || || ||||| ||||||||| |||||| | || || ||| ||| || Sbjct 57809 AAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTGT 57750 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | ||||||||| ||||||||||| ||||| || || || || ||||| ||||| ||| Sbjct 57749 AATGGTATTCTCTTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAAG 57690 Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588 |||||| | | || || | | || |||| || || || || || || |||| Sbjct 57689 ATTACTCGTG--CTGTCGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 57632 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 || | | | | || |||||||| |||||| || ||||| || | ||||||| | | Sbjct 57631 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCA 57572 Query 161649 TGTTACAACAGGA 161661 || |||| || || Sbjct 57571 TGCTACAGCAAGA 57559 >seq145 Length=75589 Score = 127 bits (140), Expect = 3e-24 Identities = 253/373 (68%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| | || ||| | || ||| |||| || || || || ||| | ||||| ||| Sbjct 44635 GGTTTAACCGATCGTGTTCGTTTCTATCAAGCTTCTACTTCTGAACTCTATGGTAAAGTA 44576 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 || ||||| || || ||||||||||| ||||| || || ||||| ||||| ||||| Sbjct 44575 GTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCTCCTTATGGTGTAGCC 44516 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 || || ||||| ||||||||| |||||| | || || ||| ||| || Sbjct 44515 AAGCTTTATGGCTATTGGATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTGT 44456 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | |||||||| ||||||||||| || || || || ||| || ||||| ||||| ||| Sbjct 44455 AACGGTATTCTCTTCAACCATGAATCGCCTCGTCGTGGTCGTACCTTCGTTACCCGAAAG 44396 Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588 |||| | | | || | | | || |||| || || || || || || |||| Sbjct 44395 ATTAGTCGTG--CTGTTGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 44338 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 || | | | | || |||||||| |||||| || ||||| |||| ||||||| | | Sbjct 44337 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAGGGTATGTGGCTCA 44278 Query 161649 TGTTACAACAGGA 161661 || | || || || Sbjct 44277 TGCTGCAGCAAGA 44265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729915421117520