Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq355 113 1e-19 seq205 104 5e-17 >seq355 Length=43543 Score = 113 bits (124), Expect = 1e-19 Identities = 191/275 (69%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| |||||| |||||| ||||| || |||||||||| | |||||| Sbjct 32887 AAACGACGCTCGAATGCAGGATCTTTTTCGAT---TTCACGATATTCAGTAAGTGTTGTA 32831 Query 332085 GCACCAATTACACGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTCC 332144 || ||||| || | ||||| || | || ||||| |||| |||| |||| Sbjct 32830 GCGCCAATGCATCGCAATTCACCGCGAGCCAGCATAGGCTTCAGCAGATTGGCAGCGTCC 32771 Query 332145 ATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACA 332204 |||||||| | || | ||| || |||| | | | || ||||||||||| || | | Sbjct 32770 ATAGAACCCTCACCTTT---ACCGGCACCAAGAACAGTGTGGATTTCATCAATAAACAAA 32714 Query 332205 ATAGTA---TTTTCACGTTTCTTTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAAT 332261 ||| || | |||| || ||| | |||||| | | | | || |||||||||||| Sbjct 32713 ATAATACCTTCTTCAGATTCCTTGACTTCTTTCAAGACAGCCTTGAGACGTTCTTCAAAT 32654 Query 332262 TCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 |||||||||||||| | ||||||| | || || || Sbjct 32653 TCACCACGATACTTGGCACCAGCAATTAAAGCGCC 32619 >seq205 Length=64096 Score = 104 bits (114), Expect = 5e-17 Identities = 189/275 (69%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| |||||| |||||| ||||| || |||||||||| | |||||| Sbjct 52881 AAACGACGCTCGAATGCAGGATCTTTTTCGAT---TTCACGATATTCAGTAAGTGTTGTA 52825 Query 332085 GCACCAATTACACGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTCC 332144 || || || || | ||||||||| | || || || |||| |||| ||| Sbjct 52824 GCGCCGATGCATCGCAGCTCACCACGAGCCAGCATAGGTTTCAGCAGATTGGCAGCATCC 52765 Query 332145 ATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACA 332204 |||||||| | || | ||| || |||| | | | || ||||||||||| || | | Sbjct 52764 ATAGAACCCTCACCTTT---ACCGGCACCAAGAACAGTGTGGATTTCATCAATAAACAAA 52708 Query 332205 ATAGTA---TTTTCACGTTTCTTTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAAT 332261 || || | |||| || ||| | |||||| | | | | || |||||||||||| Sbjct 52707 ATGATACCTTCTTCAGATTCCTTAACTTCTTTCAAGACAGCCTTGAGACGTTCTTCAAAT 52648 Query 332262 TCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 |||||||||||||| | ||||||| | || || || Sbjct 52647 TCACCACGATACTTGGCACCAGCAATTAAGGCGCC 52613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113808222940592