Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq656 224 8e-54 seq862 221 1e-52 seq176 141 7e-29 seq453 102 6e-17 seq49 95.1 1e-14 >seq656 Length=25916 Score = 224 bits (248), Expect = 8e-54 Identities = 585/881 (66%), Gaps = 32/881 (4%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||| | || || ||||| | || || ||||||||||| |||||| | |||||| Sbjct 1327 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 1268 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAAGA---AAAACAT-------TT 43839 | || ||| | ||| ||||| ||||| | | || ||||| || Sbjct 1267 AGCAAGGACCTT---CAT--GATTGGG--AAAACAAGATGACTGAAAACGAACGCTTCTT 1215 Query 43840 TATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGT 43899 ||| ||| || ||||| || ||||||| || || || || |||||||| ||||| Sbjct 1214 TATCTCTCGCGTCTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGT 1155 Query 43900 T-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAA 43958 | | |||| | | ||||| | | || ||||| |||||| ||||| ||||||| Sbjct 1154 TCAAAACTTTTGTG-ATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAA 1096 Query 43959 TTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAG 44018 | || ||||| ||||| | |||| ||||||||| |||| || || || ||||||| Sbjct 1095 TCATGATTGAAAACATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAG 1036 Query 44019 ATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATA 44078 || || ||||| | | ||| ||| || || || | || || ||| | Sbjct 1035 ATAATCAAGAGAAAGAAATGCTATTTTCTGCTATTGACACTATCCCCTGTATCAAAAGAA 976 Query 44079 AAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCG 44138 | || || |||||| | || ||||| || || | |||||||| || || ||||| | Sbjct 975 AGGCTGATTGGGCCTTCAAGTGGATTTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTG 916 Query 44139 CGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAA 44198 | ||||| | ||| ||||| || ||||| || || || ||||| | || |||||| | | Sbjct 915 CCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCTATTTTTTGGCTCA 856 Query 44199 AGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAG 44258 ||||||| |||||||||||||| ||||| || ||||| || || |||||||||||| Sbjct 855 AGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAG 796 Query 44259 GCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTC-A 44317 || | ||| || |||||||| | ||| || |||| | ||||| | | | Sbjct 795 GCCTTCATACTGACTTTGCTTGTCTTTTATTTACCCATCTTCG------TAAGCGTCCTA 742 Query 44318 TGTAAGA--CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGA 44375 |||| | | ||||| | | || || || | || ||||| |||||| ||| Sbjct 741 GCCAAGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGA 682 Query 44376 CAACAGCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTG 44435 | || | || || | | || || |||||| |||||| |||||| || | Sbjct 681 CGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCCTTGATGTGCCAATACATCG 622 Query 44436 AATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG-TACAA 44494 ||| | |||| ||||| | | | | || || | ||| || || || | ||| Sbjct 621 AATTCGTTGCCGATCGCCTTATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTAC-C 563 Query 44495 AACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 || || ||||| |||||||| | || || | ||||||| || ||||| |||||||| Sbjct 562 AATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAG 503 Query 44555 CGCGTTGGAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595 || || || ||||| || || |||||| |||||| Sbjct 502 CGTGTCTCTGACTATCAACGTGCTGGTGTCATG--AACAAG 464 >seq862 Length=17893 Score = 221 bits (244), Expect = 1e-52 Identities = 581/875 (66%), Gaps = 20/875 (2%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||| | || || ||||| | || || ||||||||||| |||||| | |||||| Sbjct 16936 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 16995 Query 43790 ACTAAAGACTTAGCACATT-GGATTGCATTAAAACCACAAGAAAAACAT---TTTATATC 43845 | || ||| | ||| ||| || | ||| || | ||| | ||||| || Sbjct 16996 AGCAAGGACCTTCATGATTGGGAAAACAAGATGACC-GAAAACGAACGTTTCTTTATCTC 17054 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTC 43904 | |||||||| || ||||||| || || || || |||||||| |||||| | Sbjct 17055 TCGCGTTTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAA 17114 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 |||| | | ||||| | | || ||||| |||||| ||||| |||||||| | Sbjct 17115 CTTTTGTG-ATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGA 17173 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGC 44024 | ||||||||||| | |||| ||||||||| |||| || || || |||||||| | Sbjct 17174 TTGAAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGACAACC 17233 Query 44025 ACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAG 44084 | ||||| | | ||| ||| || || || | ||| || || || || | Sbjct 17234 AAGAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTG 17293 Query 44085 ACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTG 44144 | |||||| | |||||||| || || | |||||||| ||||| ||||| || |||| Sbjct 17294 ATTGGGCCTTCAAATGGATTTCCTCTAACGGTTCTTTTGCTGAACGTCTTGTTGCCTTTG 17353 Query 44145 CAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAAC 44204 | | ||| ||||| || ||||| || || || ||||| |||| |||||| | || |||| Sbjct 17354 CTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAAAAAC 17413 Query 44205 GAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTAC 44264 | ||| ||||||| || ||||| || ||||| || || ||||||||||||| | | Sbjct 17414 GTGGTCTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTC 17473 Query 44265 ATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTC-ATGTAAG 44323 || || |||||||| | ||| || |||| | ||||| | | | ||| Sbjct 17474 ATACTGACTTTGCTTGTCTTTTATTTACCCATCTTCG------TAAGCGTCCTAGCCAAG 17527 Query 44324 A--CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAG 44381 | | | ||||| | | || || || | || |||||||||||| |||| | Sbjct 17528 AACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATG 17587 Query 44382 CATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACA 44441 | | || || | | || || ||||| |||||| || || || |||| | Sbjct 17588 CTCTTCCCGTCGCTCTCATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCG 17647 Query 44442 TTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG-TACAAAACCCG 44500 |||| |||||| | | | | || || | ||| || || || | ||| || || Sbjct 17648 TTGCTGATCGTCTCATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTAC-CAATCCA 17706 Query 44501 TTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTT 44560 ||||| |||||||| | || || | ||||||| || ||||| |||||||| || || Sbjct 17707 TTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTC 17766 Query 44561 GGAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595 || ||||| || || |||||| |||||| Sbjct 17767 TCTGATTATCAACGTGCTGGTGTCATG--AACAAG 17799 >seq176 Length=68518 Score = 141 bits (156), Expect = 7e-29 Identities = 278/409 (68%), Gaps = 8/409 (2%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 ||||| | || | |||||||||| | || ||||| ||| || ||| ||||| ||| Sbjct 67148 CCCAAGGTGGTGAGTGGTCCTGAAGTGCTATCTAAATTTGTGGGCCAAAGTGAAGAGAAT 67207 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC- 19547 ||||| || |||||||| |||||||||||| | | || |||| | | || | Sbjct 67208 GTACGCAAGTTATTTGCTGATGCTGAAGAAGAATATAGACAAA-AGGGAGAAGAATCTGG 67266 Query 19548 TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC------ 19601 |||||| || || || | ||||| || || || |||||||| | | ||| Sbjct 67267 TTTGCATATCATCATCTTTGATGAGTTAGATGCCATCTGTAAAGCACGTGGTATGCGAAG 67326 Query 19602 TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 ||| | | || || ||| ||||||| ||||||||| || | || | || ||||| Sbjct 67327 TGGCGATACGGGTGTGGGAGACTCTGTTGTGAATCAACTCTTGGCCAAGATGGATGGTGT 67386 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | ||||| ||||||||||| | ||||| ||||| || ||| ||| | || || Sbjct 67387 CGAACAACTCAATAATATTTTGATCATTGGTATGACGAACAGAAAGGATATGATCGATGA 67446 Query 19722 CGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATG 19781 ||| | || || || || || |||||| | | || |||||| ||||| |||||| Sbjct 67447 AGCCCTTTTGCGTCCTGGCCGTTTGGAAGTGCATATGGAAATTGGTTTACCTGATGAAGC 67506 Query 19782 TGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAAT 19830 || ||| | | || ||||| || |||||||| | ||| || ||||| Sbjct 67507 AGGTCGTCTTCAGATCTTAAAGATTCATACATCTAAAATGAGAGAAAAT 67555 >seq453 Length=36563 Score = 102 bits (112), Expect = 6e-17 Identities = 381/592 (64%), Gaps = 33/592 (6%) Strand=Plus/Plus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATG- 40920 ||||||||||||||| || || || |||||||| | | |||| ||||| || ||||| | Sbjct 19109 TGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGT 19168 Query 40921 ACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 | | || | |||||||||| |||| || ||||||||||| || || || | Sbjct 19169 TGATTGTG-ATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCGACA 19227 Query 40981 CGATTAAATCCGATC---CCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037 | || ||| | ||| | ||| || || || || ||| || |||||||| | | Sbjct 19228 CTATAAAAAACAATCCTACTGATCGCAGA---ATCATTCTGTCAGCATGGAACCCTGCAG 19284 Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA--- 41094 | | | | | ||||| || || ||||||||| || ||||| ||||| || | | Sbjct 19285 ATATTCCTATCATGGCTTTACCGCCTTGTCATGCCTTTTGTCAATTTTATGTATCTAATC 19344 Query 41095 ---------ATGGTGAAC---------TGTCATGTCAATTGTATCAAAGATCAGGTGACA 41136 |||| | || |||| ||| | |||||| | || |||| | Sbjct 19345 CACCTCAGGATGGCGGACGTGCCAAGTTGTCTTGTGTGCTTTATCAACGTTCTTGTGATA 19404 Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196 ||||||| || || || || || || || |||||| || | || |||||||| | Sbjct 19405 TGGGACTGGGTGTTCCTTTCAATATTGCCTCTTATGCACTTTTGACACGCATGATTGCGC 19464 Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACA 41256 | || || || | | ||||||||||| | || || | || ||| |||| |||| Sbjct 19465 ATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTTATG 19524 Query 41257 TTAATCACATAGA-GCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACG 41315 | |||| | || || |||| |||| | ||| |||| | || || || || Sbjct 19525 TGGATCATCTTGACGCACTTAA-GCAACAGATTCAACGTGAACCCAAGCCTTTCCCTACT 19583 Query 41316 CTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGCATCGATGATTTTGTCGTT 41375 || || || || || || | || |||||||| | || |||||||| ||| Sbjct 19584 TTAAAAATCAACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTTTGT-GTT 19642 Query 41376 TGCG-ATTACAATCCGTACCCTAAAATCCACATGGACATGTCTGTATGATAA 41426 | | | |||||||| || |||||| | ||| | |||||||| | |||| Sbjct 19643 AGAGAACTACAATCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAA 19694 >seq49 Length=122128 Score = 95.1 bits (104), Expect = 1e-14 Identities = 275/418 (66%), Gaps = 29/418 (7%) Strand=Plus/Plus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 |||||| |||||||| || || || |||||||| | | |||| ||||| || ||||| | Sbjct 120093 TGAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGT 120152 Query 40922 CACTATGTACT-CTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 | ||| | |||||||||| |||| || ||||||||||| || || || | Sbjct 120153 TGAT-TGTGATACTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTGACA 120211 Query 40981 CGATTAAATCCGATCCC---GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037 | || ||| | ||||| ||| || || || || | | || |||||||| | | Sbjct 120212 CTATAAAAAACAATCCCACTGATCGCAGA---ATCATTCTATCAGCATGGAACCCTGCAG 120268 Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTT------ 41091 | | | | | ||||| || |||||||||||| || ||||| ||||| || | Sbjct 120269 ATATTCCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAATTTTATGTATCTAATC 120328 Query 41092 ----GCA--ATGGTGAAC-TGTCATGTCA-ATTG-------TATCAAAGATCAGGTGACA 41136 ||| |||| | || || || || | ||| |||||| | || |||| | Sbjct 120329 CACCGCAGGATGGCGGACGTGCCAAGTTATCTTGTGTGCTCTATCAACGTTCTTGTGATA 120388 Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196 |||| || || || || || || || || |||||| || | || |||||||| | Sbjct 120389 TGGGGCTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTGCGC 120448 Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 | || || || | | ||||||||||| | || || | || ||| |||| |||| Sbjct 120449 ATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTTA 120506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397448472431770