Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq291 181 9e-41 seq815 172 5e-38 seq686 131 1e-25 seq769 125 6e-24 seq71 111 1e-19 seq439 109 5e-19 seq175 109 5e-19 seq243 107 2e-18 >seq291 Length=50391 Score = 181 bits (200), Expect = 9e-41 Identities = 428/639 (67%), Gaps = 13/639 (2%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCA--CACG-CCGT-TCTGTTCAACTCGCTTCATAAACAAATCC 131668 |||| || | ||| ||||| ||| |||| |||| || |||| ||| || | ||| Sbjct 27675 TGGGGCAAAATAGAGACCAATCACCACCGTCTCTG----ACACGCTGCATGAAAAGATCA 27620 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728 || ||||| | || || |||||||| | |||| | | || ||| |||| | ||||| Sbjct 27619 GGAACCCAGAGAGCATAGAACAGATCACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTT 27560 Query 131729 ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788 ||| | ||||||| |||||||| ||||||||||||||||| |||| ||| | |||| Sbjct 27559 CGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCG 27500 Query 131789 CCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845 || ||| ||||||||||||| |||| |||| || | |||||| | || || | | Sbjct 27499 CCCGGACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGC 27440 Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905 |||||| || ||||||| || || ||||||| |||||| ||| | || | Sbjct 27439 ATGGGCAATAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGA 27380 Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGT 131964 || ||||||| ||| | |||||||| || || || || |||||| | || || | | Sbjct 27379 ATGTTGTGAATGTTCAAGCCAATACCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTT 27321 Query 131965 TAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGA 132024 || || | |||||||||||| | || | ||| || || || ||||| || Sbjct 27320 GAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGA 27261 Query 132025 CAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTT 132084 || || | || |||||| || ||| | || || || |||||||| || ||| Sbjct 27260 CATTTGGGGACGAGGTGTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTATTT 27201 Query 132085 TTTGGCCATGCACCGATACGATTGTATAGCGGACTCGATATCGCCCAGATGTATGGTCAA 132144 || || ||| | || | | ||||| | || |||||| ||| || | Sbjct 27200 TTCGGACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGAT 27141 Query 132145 TGCGACCCGCATGTACATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAA 132204 ||| || |||||| || |||||| || || || | |||||||| || |||| | Sbjct 27140 TGCAACACGCATGATCAAATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAG 27081 Query 132205 ATAACCGTTTTCCAAAGTTTTGAAACCAAAATATTTGTA 132243 ||| || | |||||||||||||| | ||||| Sbjct 27080 GTAAGAACGCTCGAGGGTTTTGAAACCAAAGAAGTTGTA 27042 >seq815 Length=19846 Score = 172 bits (190), Expect = 5e-38 Identities = 426/639 (67%), Gaps = 13/639 (2%) Strand=Plus/Plus Query 131613 TGGGACACATTAGCGACCA--CAC-GCCGT-TCTGTTCAACTCGCTTCATAAACAAATCC 131668 ||||||| | || ||||| ||| ||||| |||| || |||| ||| || | ||| Sbjct 16954 TGGGACAAAACAGAGACCAATCACCGCCGTCTCTG----ACACGCTGCATGAAGAGATCA 17009 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728 || | ||| | || || |||||||| | |||| | | || ||| | || | ||||| Sbjct 17010 GGAATCCAGAGAGCATAGAACAGATCGCGAGCTCTGATTTCGTCTTTGCCAAAGTTTTTT 17069 Query 131729 ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788 ||||| ||||||| |||||||| ||||||||||||||||| |||| ||| | |||| Sbjct 17070 CGCAAATCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCG 17129 Query 131789 CCTTTGCG---CTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845 || || ||||||||||||| |||| |||| || | |||||| | || || | | Sbjct 17130 CCCGGACGTTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGC 17189 Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905 |||||| || ||||||| || || ||||||| ||| || ||| | || | Sbjct 17190 ATGGGCAGTAATCCGTTGGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGA 17249 Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGT 131964 || ||||||| ||| | ||||| || || || || || |||||| | || || | | Sbjct 17250 ATGTTGTGAATGTTCAAGCCAATGCCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTT 17308 Query 131965 TAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGA 132024 || || | |||||||||||| | || | ||| || || |||||||| || Sbjct 17309 GAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGA 17368 Query 132025 CAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAAAAGTTT 132084 || || | || |||||| || ||| || || || || ||||||||||| | | Sbjct 17369 CATTTGGGGACGAGGTGTGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCT 17428 Query 132085 TTTGGCCATGCACCGATACGATTGTATAGCGGACTCGATATCGCCCAGATGTATGGTCAA 132144 || | ||| | || | | ||||| | || |||||| ||| || | Sbjct 17429 TTCAGACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGAT 17488 Query 132145 TGCGACCCGCATGTACATGTGTTGAATGCGCTCGGCCGTTTTGCCGTCGATTTTGATCAA 132204 ||| || |||||| || |||||| || || || | |||||||| || |||| | Sbjct 17489 TGCAACACGCATGATCAAATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAG 17548 Query 132205 ATAACCGTTTTCCAAAGTTTTGAAACCAAAATATTTGTA 132243 ||| || | |||||||||||||| | ||||| Sbjct 17549 GTAAGAACGCTCGAGGGTTTTGAAACCAAAGAAGTTGTA 17587 >seq686 Length=24674 Score = 131 bits (144), Expect = 1e-25 Identities = 170/234 (73%), Gaps = 1/234 (0%) Strand=Plus/Minus Query 27015 TTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073 |||||| || || || | || | ||||| || | ||||| ||||||||||| || || Sbjct 10782 TTATTGACCGCCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATA 10723 Query 27074 GTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATC 27133 || |||| | || |||||||||| |||||||| ||| |||||||||| ||||| || Sbjct 10722 ATCACTCAAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTC 10663 Query 27134 CGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGC 27193 || || | ||| || ||||| ||||| | || | |||| | | | || | | Sbjct 10662 AGGAGGGATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGA 10603 Query 27194 TTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||||||||| ||| || | ||||| || ||||| || || ||||||||||| Sbjct 10602 TTCAACTTCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 10549 >seq769 Length=21522 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || |||||||| || |||||||| | | | || | |||||| Sbjct 14277 ACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCTTCG 14218 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||| || | |||||||| |||||||| || || | ||| || || || Sbjct 14217 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 14158 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | ||| | | || | |||||| | | ||||||||||| ||| || | || Sbjct 14157 ATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTCTTT 14098 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || |||||||||||||| Sbjct 14097 CCAGTAAGTGTCTTGACAAAGATTTGCAT 14069 >seq71 Length=102704 Score = 111 bits (122), Expect = 1e-19 Identities = 168/238 (71%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 27012 TAATTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATT 27070 || |||||| || || || | || | ||||| || | ||||| || ||||| || || Sbjct 21242 TATTTATTGACCGCCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTT 21301 Query 27071 GTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTG 27130 |||||| |||| | || | || || ||||| || |||||| |||||||||| ||||| Sbjct 21302 GTAGTCACTCAAAGTACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTG 21361 Query 27131 ATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGT 27190 || || || | ||| || ||||| |||||| | || | |||| | | | || | Sbjct 21362 GTCAGGAGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGA 21421 Query 27191 GGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | || || | || || || ||||| || ||||||||||||||| Sbjct 21422 GGACTCAACCTCCAAGGTAATGGTCTTACCAGTGAGAGTCTTGACAAAGATTTGCATA 21479 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || ||||| || |||||||| |||| | || | || || Sbjct 21498 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCA 21557 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||| || | || || | |||||| || || || | ||| || || || Sbjct 21558 AGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 21617 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | |||| | | | || | | ||| ||||||| ||| || | ||| Sbjct 21618 ATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTG 21677 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || || ||||||||||| Sbjct 21678 CCGGTAAGAGTCTTTACGAAGATTTGCAT 21706 >seq439 Length=37054 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || |||||||| ||||| || |||| | | || |||||||| Sbjct 23582 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCG 23523 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||||||| |||||||||| |||||||| || || | ||| || ||||| | Sbjct 23522 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 23463 Query 27159 ATCTT 27163 ||||| Sbjct 23462 ATCTT 23458 >seq175 Length=68572 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || |||||||| ||||| || |||| | | || |||||||| Sbjct 14532 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCG 14473 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||||||| |||||||||| |||||||| || || | ||| || ||||| | Sbjct 14472 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 14413 Query 27159 ATCTT 27163 ||||| Sbjct 14412 ATCTT 14408 >seq243 Length=56764 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || ||||| || || |||||||| | | | || | |||||| Sbjct 37869 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCG 37928 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||| || | |||||||| |||||||| || || | ||| || || || Sbjct 37929 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 37988 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || | ||| | | || | |||||| | | || ||||||| ||| || || Sbjct 37989 ATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATCTTT 38048 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || |||||||||||||| Sbjct 38049 CCAGTAAGTGTCTTGACAAAGATTTGCAT 38077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424926352008048