Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq291 140 4e-28 seq815 122 1e-22 seq328 109 6e-19 seq862 105 7e-18 seq228 100 3e-16 seq656 91.5 2e-13 >seq291 Length=50391 Score = 140 bits (154), Expect = 4e-28 Identities = 311/462 (67%), Gaps = 6/462 (1%) Strand=Plus/Plus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| | |||| ||||| || ||||| | || || || || || Sbjct 27176 TGAGACATACAACTTGATGTCCGAAAAATACTTCACACACGCTAGTCCTACTCTATTTAA 27235 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || || || || || || ||||| || ||| || | | |||||||| || || Sbjct 27236 TGCAGGCACACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCTCACCATGAAGGAAGATTC 27295 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 |||||| || ||||| ||||||||||| ||||| || ||||||||| | || || Sbjct 27296 GATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGG 27355 Query 53422 TATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 ||| || | || | | | ||| | ||||| | || || || || || |||| Sbjct 27356 TATTGGCTTGAACATTCAC-AACATTCGTGCTAGTGGATCATACATTGCCGGCACCAACG 27414 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 | | || | ||| | |||| |||||||| || |||||||| ||||| || || ||| Sbjct 27415 GTTACTCCAACGGATTATTGCCCATGCTCCGTGTTTTCAACAATACGGCTCGTTATGTCG 27474 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 | || || ||| ||||| ||| | ||||| || ||| | || || ||||| || | Sbjct 27475 ATCAAGGCGGTAATAAGCGTCCGGGCGCATTCGCAATGTACTTGGAACCCTGGCATGCAG 27534 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCG 53658 ||||| | ||| | || |||| || ||| | || || || | ||| || Sbjct 27535 ACATTTTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAGACGAAATCAGAGCT--CG 27592 Query 53659 TGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCA 53700 ||| ||||| ||||| ||| |||| || || |||||||| Sbjct 27593 TGATCTGTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCA 27634 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/155 (74%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACC--AGTCCCAGTCTCTGAACATCT 55832 ||||||||| |||||||||||||||||| || |||| |||| || | ||||||||| Sbjct 28689 ATTGACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAGTCAAAG--TTTGAACATCT 28746 Query 55833 TCATGG-AGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAG 55891 | |||| ||| || | ||| ||| | | | ||||||||||| || ||| | ||| Sbjct 28747 TTATGGCTGAACCCAACTTTGG-TAAGCTCACCAGTATGCACTTTTATGGTTGGCAAAAG 28805 Query 55892 GGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 ||| | ||||| || ||||| || || || || || Sbjct 28806 GGATTAAAGACAGGCATGTATTACCTTCGTACACG 28840 >seq815 Length=19846 Score = 122 bits (134), Expect = 1e-22 Identities = 307/462 (66%), Gaps = 6/462 (1%) Strand=Plus/Minus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| ||| |||||||| ||||| | || || | || || Sbjct 17453 TGAGACATACAACTTGATGTCTGAAAGATACTTTACACACGCTAGTCCTACTTTATTTAA 17394 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 || || || || || || ||||| |||||| || | | |||||||| || || Sbjct 17393 TGCAGGCACACCTCGTCCCCAAATGTCTTCTTGCTTCTTGCTCACCATGAAGGAAGATTC 17334 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 |||||| || ||||| ||||||||||| ||||| || ||||||||| | || || Sbjct 17333 GATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGG 17274 Query 53422 TATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACG 53480 || || | || | | | ||| | ||||| | || || || || || |||| Sbjct 17273 CATTGGCTTGAACATTCAC-AACATTCGTGCTAGTGGATCATATATTGCCGGCACCAACG 17215 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 | | || | ||| | |||| ||||| || || |||||||| ||||| || || ||| Sbjct 17214 GTTACTCCAACGGATTACTGCCCATGCTACGTGTTTTCAACAATACGGCTCGTTATGTCG 17155 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 | || || ||| || || ||| | ||||| || ||| | || || ||||| || | Sbjct 17154 ATCAAGGCGGTAATAAACGTCCGGGCGCATTCGCAATGTACTTGGAACCCTGGCATGCAG 17095 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCCG 53658 ||||| | ||| | || |||| || || | || || || | ||| || Sbjct 17094 ACATTTTCACCTTTTTAGATTTGCGAAAAAACTTTGGCAAAGACGAAATCAGAGCT--CG 17037 Query 53659 TGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCA 53700 || ||||| ||||| |||||||| || ||||||||||| Sbjct 17036 CGATCTGTTCTATGCTCTCTGGATTCCTGATCTCTTCATGCA 16995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/155 (74%), Gaps = 6/155 (4%) Strand=Plus/Minus Query 55775 ATTGACATGAGTGCTGATCGTGGTGCGTACATCGACC--AGTCCCAGTCTCTGAACATCT 55832 ||||||||| |||||||||||||||||| || |||| |||| || | ||||||||| Sbjct 15940 ATTGACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAGTCAAAG--TTTGAACATCT 15883 Query 55833 TCATGG-AGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAG 55891 | |||| ||| || | ||| ||| | | | ||||||||||| || ||| | ||| Sbjct 15882 TTATGGCTGAACCCAACTTTGG-TAAGCTCACCAGTATGCACTTTTATGGTTGGCAAAAG 15824 Query 55892 GGACTCAAGACGGGTATGTACTATCTGCGGACCCG 55926 ||| | ||||| || ||||| || || || || || Sbjct 15823 GGATTAAAGACAGGCATGTATTACCTCCGTACACG 15789 >seq328 Length=46411 Score = 109 bits (120), Expect = 6e-19 Identities = 267/402 (66%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 || |||||||| || || || || || |||||||||||||||| | | ||||| || Sbjct 23361 AAATACTTTACTCATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTG 23420 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || || |||||||| || ||||| || ||| ||||| ||||||||||| || || Sbjct 23421 TCTAGTTGCTTCCTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATC 23480 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACG-T 53445 | |||||| | ||||| |||| | || ||| | || | |||||| || | | Sbjct 23481 ACCACGTGTGCTCGTATCTCAAAGTCTGCTGGCGGTGTTGGCGT-TGCTGCTCAAAAGAT 23539 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 |||| ||| | ||| || || ||||| | || |||| ||| | || || Sbjct 23540 TCGTGGCTCTGGCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATCATTCCAAT 23599 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGG 53565 |||| | ||||| || |||| || || | || | || || ||||| || ||||| || Sbjct 23600 GCTCAGAGTCTTTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGG 23659 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 || || ||||| | || || ||||| | |||| | | || || | || |||| Sbjct 23660 TAACTTTGCTGTCTACATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCG 23719 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667 ||| | |||| || || |||||| || ||| |||| Sbjct 23720 CAAGAACAATGGTGCTGAGGAAATGCGCGCACGCGACTTGTT 23761 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785 |||||| || | ||| ||| || ||||||||| |||| | | | | ||||||||| Sbjct 25013 TCTCAAAAAGCTATACAAGACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGC 25072 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA-TGGAGAATC 55844 ||||| | || || | || ||||| || || ||| |||| | || | || ||| | Sbjct 25073 CGCTGACAGAGGAGCCTTTATTGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACC 25132 Query 55845 CTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 | |||| || | || ||| ||||||||||| | |||||||||||||| ||||| | Sbjct 25133 AAACTTTGGCAAACT-GACCTCTATGCACTTTTATGCCTGGAAGAAGGGACTAAAGACTG 25191 Query 55905 GTATGTACTATCTG 55918 | ||||| ||| || Sbjct 25192 GCATGTATTATTTG 25205 >seq862 Length=17893 Score = 105 bits (116), Expect = 7e-18 Identities = 198/289 (69%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||| | | ||||||||||| || | | || ||||| || ||||| || Sbjct 17468 CCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCACGTTTT 17409 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | ||||||||||| | ||||||||| ||||||||| ||||||||| |||||| Sbjct 17408 TTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAAG 17349 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGA--GCCCATTCAG 74946 || ||||| |||| || || | | | || | ||||| | ||| ||||| |||| Sbjct 17348 GCAACAAGACGTTCAGCAAAAGAACCGTTAGAGGAAATCCA--TTTGAAGGCCCAATCAG 17291 Query 74947 CTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGG 75006 | |||| |||| ||||| ||| || || || ||||| || | ||||||| | Sbjct 17290 CCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCTTTCTCTTGGT 17231 Query 75007 GATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055 || |||| ||||||||| ||| ||| || || | ||||| Sbjct 17230 TGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 17182 >seq228 Length=59556 Score = 100 bits (110), Expect = 3e-16 Identities = 265/402 (66%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 || |||||||| || || || || || |||||||||||||||| | | ||||| || Sbjct 44666 AAATACTTTACTCATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTG 44725 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || || || ||||| || ||||| || ||| ||||| ||||||||||| || || Sbjct 44726 TCTAGTTGTTTCCTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATC 44785 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACG-T 53445 | |||||| | |||||||||| | || ||| | || | |||||| || | | Sbjct 44786 ACCACGTGTGCTCGTATCTCCAAGTCTGCTGGCGGTGTTGGCGT-TGCTGCTCAAAAGAT 44844 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 |||| ||| | ||| || || |||||| | || |||| || | || || Sbjct 44845 TCGTGGCTCTGGCTCTTATATCGCAGGAACAAACGGCACCTCCAATGGCATTATTCCAAT 44904 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGG 53565 |||| | ||||| || |||| || || | || | || || ||||| || ||||| || Sbjct 44905 GCTCAGAGTCTTTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGG 44964 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 || || |||| | || || ||||| | ||| | | || || | || |||| Sbjct 44965 TAACTTTGCTGTCTATATAGAACCTTGGCATGTCGATGTATTCGAATTCTTGGACTTGCG 45024 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT 53667 ||| | |||| || || |||||| || ||| |||| Sbjct 45025 CAAGAACAATGGTGCTGAGGAAATGCGCGCACGCGACTTGTT 45066 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 55726 TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAG 55785 |||||| || | ||| || || ||||||||| |||| | | | | ||||||||| Sbjct 46318 TCTCAAAAAGCTATACAAAACAGTATGGGAGATTTCACAAAGAACTATTATTGACATGGC 46377 Query 55786 TGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA-TGGAGAATC 55844 |||||| | || || | |||||||| || || ||| |||| | || | || ||| | Sbjct 46378 CGCTGATAGAGGAGCTTTTATCGACCAATCTCAATCTATGAATTTGTTTACTGCCGAACC 46437 Query 55845 CTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 | |||| ||| ||| ||| ||||||||||| | |||||||||||| | ||||| | Sbjct 46438 AAACTTTGGC-AAGCTGACCTCTATGCACTTTTATGCCTGGAAGAAGGGATTAAAGACTG 46496 Query 55905 GTATGTACTATCTG 55918 | ||||||||| || Sbjct 46497 GCATGTACTATTTG 46510 >seq656 Length=25916 Score = 91.5 bits (100), Expect = 2e-13 Identities = 193/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||||||||| | | ||||||||||| || | | |||||||| | ||||| || Sbjct 794 GCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCACGTTT 853 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | |||||| || | | ||||||||| ||||||||| ||||||||| ||||| Sbjct 854 CTTGAGCCAAAAAATAGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAGCAAA 913 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGC 74947 ||| ||||| || | || || | | | || | ||||| | ||||| ||||| Sbjct 914 GGCAACAAGACGCTCAGCAAAAGAACCGTTAGAGGAAATCCACTTGAAGGCCCAATCAGC 973 Query 74948 TTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGG 75007 |||| ||||| |||| ||| || || || || || || | ||||||| Sbjct 974 CTTTCTTTTGATACAGGGGATAGTGTCAATAGCAGAAAATAGCATTTCTTTCTCTTGATT 1033 Query 75008 ATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAAT 75055 ||| |||| ||||||||| ||| ||| || || | ||||| Sbjct 1034 ATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547205370329200