Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq243 196 5e-45 seq769 185 1e-41 seq71 181 1e-40 seq686 170 2e-37 seq80 131 2e-25 seq228 111 2e-19 seq439 96.9 4e-15 seq175 96.9 4e-15 seq328 93.3 5e-14 seq145 93.3 5e-14 >seq243 Length=56764 Score = 196 bits (216), Expect = 5e-45 Identities = 182/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 ||| |||||||||||||||||||| ||||| || |||| |||||| | || || ||||| Sbjct 38081 TATCATGCAAATCTTTGTCAAGACACTTACTGGAAAGATGATTACTTTAGAAGTCGAGTC 38022 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 ||| | || | ||| | || |||||||| |||||||| || |||||||| || Sbjct 38021 TTCTGACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGA 37962 Query 27522 CCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTA 27581 || || ||||| || ||||||||||| |||||||| |||| |||||||||| ||||| Sbjct 37961 TCAACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTA 37902 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| ||||||||||||| ||||||||| | ||| | ||||| || ||||| Sbjct 37901 TAACATCCAAAAGGAATCTACTCTTCATTTGGTCCTTCGTCTCCGTGGTGG 37851 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| ||| | || | ||| ||| | | || || | ||| | Sbjct 37849 ATGCAAATATTTGTCAAGACACTTGCTGGAACGACAATTTCGTTAGAAGTCAACTCATCT 37790 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| | ||| | | |||| ||||||||| || | || | ||||| || | || Sbjct 37789 GATACCGTTGATATTATGAAAAGTAAAATTCAAGAAAGAGAAGACATTCCGTCAAATCAA 37730 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| |||||||| || |||||||| ||| || ||| || || ||||| Sbjct 37729 CAACGTTTAATCTTTGCTGGCAAACAACTCGAAAATGGTCATACTCTGAATGAATATAAC 37670 Query 27586 GTCCAAAAGGAATC 27599 |||||| ||||| Sbjct 37669 ATCCAAAGTGAATC 37656 >seq769 Length=21522 Score = 185 bits (204), Expect = 1e-41 Identities = 179/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||||||||||||||| ||||| || ||||| |||||| | || ||||| || Sbjct 14066 ATCATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTTGAATCT 14125 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| | || | ||| | || || ||||| |||||||| || |||||||| || Sbjct 14126 TCTGACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGAT 14185 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || ||||| || ||||||||||| |||||||| |||| |||||||||| |||||| Sbjct 14186 CAACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTAT 14245 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | ||||||||||| |||||||| | ||| | ||||| || ||||| Sbjct 14246 AACATTCAAAAGGAATCTACTCTTCACTTGGTCCTTCGTCTCCGTGGTGG 14295 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| ||| | || | ||| ||| | | || ||| | ||| | Sbjct 14297 ATGCAAATATTTGTCAAGACACTTGCTGGAACGACAATTTCGTTAGAAGTTAACTCATCT 14356 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| | ||| | | |||| ||||||||| || | || | ||||| || | || Sbjct 14357 GATACCGTTGATATTATGAAAAGTAAAATTCAAGAAAGAGAAGACATTCCGTCAAATCAA 14416 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| ||||| || || |||||||| ||| || ||| | || ||||| Sbjct 14417 CAACGTTTAATCTTTGCGGGCAAACAACTCGAAAATGGTCATACTTTGAATGAATATAAC 14476 Query 27586 GTCCAAAAGGAATC 27599 |||||| ||||| Sbjct 14477 ATCCAAAGTGAATC 14490 >seq71 Length=102704 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || ||||| |||||||||||||| |||||| | || || || || Sbjct 21707 AATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATCTTC 21648 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||||| || | |||| | ||| || ||||| |||||||| || || ||||| ||||| Sbjct 21647 TGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGACCA 21588 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| | || || ||||||||||| ||||| ||||||| |||||| | ||||| || Sbjct 21587 ACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTACAA 21528 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| || ||||| | ||| | |||||||| ||||| Sbjct 21527 CATCCAAAAGGAATCTACCCTTCACTTGGTCCTTCGTCTTCGTGGTGG 21480 Score = 168 bits (186), Expect = 8e-37 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || || ||||| ||||| | ||||||||||| | Sbjct 21478 ATGCAAATCTTTGTCAAGACTCTCACTGGTAAGACCATTACCTTGGAGGTTGAGTCCTCT 21419 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 ||||| |||| |||| | ||| || || || || ||||| || |||||||| ||||| Sbjct 21418 GATAGTATTGAAAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCTCCTGACCAA 21359 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| ||||| || || ||||| || ||||||| ||||| | ||||| || Sbjct 21358 CAACGTCTCATTTTCGCCGGCAAGCAGCTTGAGGATGGCCGTACTTTGAGTGACTACAAC 21299 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 ||||||||||||| || ||||| | || | |||||||| || || ||| Sbjct 21298 ATCCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGCGGTCAA 21248 >seq686 Length=24674 Score = 170 bits (188), Expect = 2e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||| || ||||| |||||||||||||| |||||| | || ||||| || Sbjct 10548 AATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTTGAATCTTC 10607 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||||| || | |||| | ||| || ||||| || ||||| || || ||||| ||||| Sbjct 10608 TGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGACCA 10667 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| ||||| |||||||| |||||||| || | |||||| | || ||||| Sbjct 10668 ACAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTATAA 10727 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 | ||||| ||||| |||||||| | || | |||||||| || || ||| Sbjct 10728 CATTCAAAAAGAATCTACTCTTCACTTGGTTCTTCGTCTTCGTGGCGGTCAA 10779 >seq80 Length=97372 Score = 131 bits (144), Expect = 2e-25 Identities = 117/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| |||||||| || |||||||| ||||| || ||||| || ||||| ||||| Sbjct 13790 AAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAACGTCTTATCTTTGCCGGTAAA 13731 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 |||||||| || | ||||||| | ||| |||||||| ||||||||||||| ||||| || Sbjct 13730 CAACTCGAAGACGGTCGTACCTTGAGC-GACTATAACATCCAAAAGGAATCTACTCTCCA 13672 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| | |||||||| ||||| Sbjct 13671 CTTAGTTCTCCGTCTTCGTGGTGG 13648 >seq228 Length=59556 Score = 111 bits (122), Expect = 2e-19 Identities = 131/175 (75%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 80043 CAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAG 80102 || |||||||||||| ||||| | |||||||||||| | || | ||||||||| | || Sbjct 46510 CAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAG 46451 Query 80103 CTTCGCAAGTGTGGGGTTCTCCA-TGAAGATGTTCAGAGACTGAGACTGACAGATGAAAG 80161 ||| ||| || ||||| || | || | |||| ||| ||||| || ||| |||| Sbjct 46450 CTTGCCAAA-GTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCGATAAAAG 46392 Query 80162 CCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 | || | ||| || ||||| |||||||| | |||||| ||| ||||||||||| Sbjct 46391 CTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGT 46337 >seq439 Length=37054 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | ||| || || || || ||||| || || ||||| || || Sbjct 23433 TGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCA 23492 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| ||||| || ||||| |||||||| || | ||||||| | || || || Sbjct 23493 ACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAA 23552 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || ||||| | || | |||||||| ||||| Sbjct 23553 CATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGG 23600 >seq175 Length=68572 Score = 96.9 bits (106), Expect = 4e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||||| ||| | ||| || || || || ||||| || || ||||| || || Sbjct 14383 TGACACCATTGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCTCCTGATCA 14442 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||||| ||||| || ||||| |||||||| || | ||||||| | || || || Sbjct 14443 ACAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGTCGTACCTTGAGTGATTACAA 14502 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||||||| || ||||| | || | |||||||| ||||| Sbjct 14503 CATTCAAAAGGAATCTACCCTTCACTTGGTTCTCCGTCTTCGTGGTGG 14550 >seq328 Length=46411 Score = 93.3 bits (102), Expect = 5e-14 Identities = 127/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 80043 CAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAG 80102 || ||| |||||||| ||||| || |||||||||||| | || | ||||||||| | || Sbjct 25205 CAAATAATACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAG 25146 Query 80103 CTTCGCAAGTGTGGGGTTCTCCA-TGAAGATGTTCAGAGACTGAGACTGACAGATGAAAG 80161 || || | || ||||| || | || | |||| ||| ||||| || || || | Sbjct 25145 -TTTGCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGG 25087 Query 80162 CCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGT 80216 | || | || || ||||| |||||||| | |||||| ||| ||||||||||| Sbjct 25086 CTCCTCTGTCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGT 25032 >seq145 Length=75589 Score = 93.3 bits (102), Expect = 5e-14 Identities = 212/316 (67%), Gaps = 11/316 (3%) Strand=Plus/Minus Query 24779 GGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTG 24838 ||| || || || || ||||| || || ||||| || | ||| | | | || || Sbjct 44558 GGAAACAACACCCTTCTATCCCCGTTCTCCTTATGGTGTAGCCAAGCTTTATGGCTATTG 44499 Query 24839 GATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAA 24898 ||| || ||||||||||| | | || | ||| || ||||| ||||| ||||| Sbjct 44498 GATTACGGTCAACTACCGTGAATCATACAACATGTTTGCCTGTAACGGTATTCTCTTCAA 44439 Query 24899 CCATGAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGATTACTCTTGGTATTG- 24957 |||||| ||| ||||| || | | || ||||| |||||||||| || || | ||| Sbjct 44438 CCATGAATCGCCTCGTCGTGGTCGTACCTTCGTTACCCGAAAGATTAGTCGTGCTGTTGC 44379 Query 24958 -----ACCA-TTGGATCAAGACAAGGGCACCTATTGAGCTGGGAAACCTAGATGCCAAAC 25011 ||| |||| | | |||| | || || | || || || | ||||| || | Sbjct 44378 AGACATCCACTTGG--GACGTCAAGAGTGCC--TTTATCTCGGTAATATTGATGCTAAGC 44323 Query 25012 GTGATTGGGGGCATGCAGCCGACTACGTCGACGCCATGTGGCGCATGCTCCAACAGAATA 25071 |||||||||| ||||| || || ||||| | ||||||| |||||| || || || Sbjct 44322 GTGATTGGGGACATGCTCGTGATTATGTCGAGGGTATGTGGCTCATGCTGCAGCAAGATC 44263 Query 25072 AGCCAGAGGATTTTGT 25087 | || | |||||||| Sbjct 44262 AACCTCAAGATTTTGT 44247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299321720480