Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq453 109 5e-19 seq49 100 2e-16 >seq453 Length=36563 Score = 109 bits (120), Expect = 5e-19 Identities = 184/261 (70%), Gaps = 14/261 (5%) Strand=Plus/Minus Query 118357 TTGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTT- 118415 |||||||| || || | ||||||||||||||| || || || ||| | || | ||| Sbjct 19654 TTGTAGTTCTCTAACACAAAATCTTCAAACTTGAAATCATCGATAGT----ATCTACTTT 19599 Query 118416 ---GTTTATGGATAGTGTGGGAAACGGGAGAGGCTCCCTTGTGAGT-TGGAGTTTCAGTG 118471 ||| || || || || || || || || | | ||| | || | || |||| Sbjct 19598 ACGGTTGATTTTTAAAGTAGGGAAAGGCTTGGGTTCACGT-TGAATCTGTTGCTTAAGTG 19540 Query 118472 GCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTG 118531 |||| |||| || ||| ||||| | ||| || ||||||||||||||||||||||| Sbjct 19539 CGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGAT 19480 Query 118532 TAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG--TAGCTGGCTACATTAAA 118589 ||| |||| | || ||||||||| |||||| || || || ||| | ||| || Sbjct 19479 CAAGATCTGTTACATGCGCAATCATGCGTGTCAA--AAGTGCATAAGAGGCAATATTGAA 19422 Query 118590 AGGAACACCCAGACCCATGTC 118610 |||||||||||| ||||| || Sbjct 19421 AGGAACACCCAGTCCCATATC 19401 >seq49 Length=122128 Score = 100 bits (110), Expect = 2e-16 Identities = 179/259 (69%), Gaps = 12/259 (5%) Strand=Plus/Minus Query 118358 TGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTT-- 118415 ||||||| || || | ||||||||||||||| || || || ||| | || | ||| Sbjct 120637 TGTAGTTCTCTAATACAAAATCTTCAAACTTGAAATCATCGATAGT----ATCTACTTTA 120582 Query 118416 --GTTTATGGATAGTGTGGGAAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGC 118473 ||| || || || || || || || || | | | || | || |||| Sbjct 120581 CGGTTGATTTTTAAAGTAGGGAAAGGTTTGGGTTCACGTTGAACCTGTTGCTTGAGTGCG 120522 Query 118474 TCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTA 118533 |||| |||| || ||| ||||| | ||| || ||||||||||||||||||||||| | Sbjct 120521 TCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGATCA 120462 Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG--TAGCTGGCTACATTAAAAG 118591 || |||| | || ||||||||| ||||| ||| || || || | ||| |||| Sbjct 120461 AGATCTGTTACATGCGCAATCATGCGTGTCA--AAAGTGCATAAGAAGCAATATTGAAAG 120404 Query 118592 GAACACCCAGACCCATGTC 118610 |||||||||| ||||| || Sbjct 120403 GAACACCCAGCCCCATATC 120385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414468950068456