Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq243 87.8 1e-12 >seq243 Length=56764 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAA-ATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||| ||||| || || |||||||| || ||| ||||| | || ||||| | Sbjct 38077 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGATG-ATTACTTTAGAAGTCGAGTCTTC 38019 Query 27849 CGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| | | ||||| || ||||||||||| ||||| |||||| |||| || Sbjct 38018 TGACACTATCGACAAT--GTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGAT 37961 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 || ||||| | || ||||| || |||||| | || || | || | | | ||| || Sbjct 37960 CAACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTAT 37901 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||| || ||| | |||||||| | ||| | ||||| || Sbjct 37900 AACATCCAAAAGGAATCTACTCTTCATTTGGTCCTTCGTCTCCGTGGTGG 37851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355855660188558