Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq769 176 1e-38 seq71 170 4e-37 seq686 167 5e-36 seq243 161 2e-34 seq80 140 8e-28 seq439 132 1e-25 seq175 127 5e-24 seq83 107 4e-18 seq815 91.5 3e-13 seq291 84.2 5e-11 >seq769 Length=21522 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||| || || ||||| |||||||| || ||||| | |||||| Sbjct 14280 AGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCT 14221 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || ||||| || |||||||| |||||||||| ||||||||||| Sbjct 14220 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 14161 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||||||||| || || ||||| |||||||| |||||| || | ||| || ||| Sbjct 14160 TGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTC 14101 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAt 211114 ||||| || || ||||| ||||| | ||||| Sbjct 14100 TTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 14069 >seq71 Length=102704 Score = 170 bits (188), Expect = 4e-37 Identities = 173/223 (78%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || | |||||| || || || ||||||||||| || || | ||| | Sbjct 21257 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAA-AG 21315 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | ||||| || ||||||||||| ||||| || || ||||||||||||||||||| | Sbjct 21316 TACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATAC 21375 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 ||||||| || ||||||||||| || || ||||| || | |||||| |||||||| | Sbjct 21376 CTTCCTTATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCA 21435 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAt 211114 || || ||||| || ||||||||||| ||||| | ||||| Sbjct 21436 AGGTAATGGTCTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 21478 Score = 158 bits (174), Expect = 3e-33 Identities = 172/226 (76%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | ||||| | |||||| || || || ||||||||||| || || | ||| | Sbjct 21485 ACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAA-AG 21543 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | ||||| || || || || || || |||||||| | |||||||||||||| | | Sbjct 21544 TACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATAC 21603 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 |||||||||| || |||||||| || || |||||||| | ||||| ||| || || | Sbjct 21604 CTTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTA 21663 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAtttt 211117 ||| |||||||| || || ||||||||||| || | |||||||| Sbjct 21664 AAGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 21709 >seq686 Length=24674 Score = 167 bits (184), Expect = 5e-36 Identities = 174/226 (77%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || | ||||||||| || |||||||| ||||||||||| | ||| | Sbjct 10770 ACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAG- 10712 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | || ||||| || || || || ||||| || || ||||||||||||||||| | | Sbjct 10711 TACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATAC 10652 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 ||||||| || || |||||||| || || |||||||| | ||||| |||||| || | Sbjct 10651 CTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACTTCTA 10592 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAtttt 211117 ||| || ||||| || || ||||||||||| || | |||||||| Sbjct 10591 AAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 10546 >seq243 Length=56764 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||||| || || |||||||||||||| || ||||| | |||||| Sbjct 37866 AGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCT 37925 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || || || || || ||||| || |||||||| |||||||||| ||||||||||| Sbjct 37926 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 37985 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || || |||||||| || || ||||| |||||||| || || || | ||| ||| || Sbjct 37986 TGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATC 38045 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAt 211114 ||||| || || ||||| ||||| | ||||| Sbjct 38046 TTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 38077 >seq80 Length=97372 Score = 140 bits (154), Expect = 8e-28 Identities = 134/169 (79%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || | ||| ||||| || || |||||||||||||| || | ||| || Sbjct 13653 ACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAA-GG 13711 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | || ||||| || || || || || |||||||| ||||||||||||||||||| | Sbjct 13712 TACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATAC 13771 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT 211060 |||||||||| || |||||||| || ||||| || |||||||| || || Sbjct 13772 CTTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGAACT 13820 >seq439 Length=37054 Score = 132 bits (146), Expect = 1e-25 Identities = 143/187 (76%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 210875 GGGTTAGCTAATATTTCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGAT 210934 ||||| | ||||| | |||||| | || || | |||||| || || || ||||| || Sbjct 23613 GGGTTCGATAATACCACCACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAAT 23554 Query 210935 GTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTT 210993 ||| ||||| | ||||| | | || ||||| || || || || ||||| || || |||| Sbjct 23553 GTTGTAATCACTCAAGG-TACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTT 23495 Query 210994 GTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGT 211053 |||| |||||||| | |||||||| || ||||||||||| || || || || ||||||| Sbjct 23494 GTTGATCAGGAGGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGT 23435 Query 211054 CAGAGCT 211060 ||||||| Sbjct 23434 CAGAGCT 23428 >seq175 Length=68572 Score = 127 bits (140), Expect = 5e-24 Identities = 131/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 |||||| | || || | |||||| || || || ||||| ||||| ||||| | ||||| Sbjct 14545 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGG- 14487 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | || ||||| || || || || ||||| || || |||||||| |||||||| | | Sbjct 14486 TACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATAC 14427 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT 211060 ||||||| || ||||||||||| || || || || |||||||||||||| Sbjct 14426 CTTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 14378 >seq83 Length=96909 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 || ||||| || || || || || |||||||| ||||||||||||||||||| |||||| Sbjct 41955 CCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCC 42014 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT 211060 ||||| || |||||||| || ||||| || |||||||| || || Sbjct 42015 TTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGAACT 42058 >seq815 Length=19846 Score = 91.5 bits (100), Expect = 3e-13 Identities = 232/353 (66%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 || ||||| | || || ||||||||| | ||||| || || ||||| || | Sbjct 16752 CCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAACGGATTA 16811 Query 178148 CCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTT 178207 || ||| | |||||| | | |||| || ||| |||| || || || || | | Sbjct 16812 CCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATTGTTTCT 16871 Query 178208 TTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACA 178267 | ||| |||||||| ||||| |||| ||||| | | || || || ||| Sbjct 16872 CTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCATCACCCCAGATT 16931 Query 178268 TCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACT 178327 |||| | || |||||||||||||| || || ||| ||| | |||| | || | || Sbjct 16932 TCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCACCGCCGTCTCTGACA 16991 Query 178328 CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCTCTCATCAGG 178387 || | ||||||||| |||| |||||| |||||||| | || | ||||| || | Sbjct 16992 CGCTGCATGAAGAGATCAGGAATCCAGAGAGCATAGAACAGATCGCGAGCTCTGATTTCG 17051 Query 178388 TCATTTCCTCCGGGTTTTCTGGCATCAACAAAGTCAAAAATGTCCACATGCCA 178440 || || || | ||||| ||| | |||| |||||||| ||||||| Sbjct 17052 TCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAGGTGAAAATGTCTGCATGCCA 17104 >seq291 Length=50391 Score = 84.2 bits (92), Expect = 5e-11 Identities = 235/356 (66%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATT 178147 || ||||| | || || ||||||||| | ||||| || || ||||| || ||| Sbjct 27877 CCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAATGG-ATT 27819 Query 178148 CCCAC-CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTT 178206 ||| ||| | ||| ||| | | |||| || ||| |||| || || || || | Sbjct 27818 ACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATTGTTTC 27759 Query 178207 TTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGAC 178266 | | || |||||||| ||||| |||| ||||| | | ||||| || |||| Sbjct 27758 TCTACCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCACCCCAGAC 27699 Query 178267 ATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCAC 178326 |||| | || ||||| ||||||||||| || ||| ||| | ||| | || | || Sbjct 27698 TTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCGTCTCTGAC 27639 Query 178327 TCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAATCTCTCTGGCTCTCATCAG 178386 || | |||||| || |||| ||||| |||||||| | || | ||||| || Sbjct 27638 ACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCACGAGCTCTGATTTC 27579 Query 178387 GTCATTTCCTCCGGGTTTTCTGGCA--TCAACAAAGTCAAAAATGTCCACATGCCA 178440 ||| || | | ||||| | ||| || | |||| |||||||| ||||||| Sbjct 27578 GTCTTTAC--CAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCCA 27525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159128920559210