Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq71 181 3e-40 seq686 172 1e-37 seq769 140 8e-28 seq80 136 9e-27 seq243 131 4e-25 seq439 120 7e-22 seq175 120 7e-22 seq83 102 2e-16 >seq71 Length=102704 Score = 181 bits (200), Expect = 3e-40 Identities = 175/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| | ||| || || ||||| ||||||| ||||| || |||||| Sbjct 21485 ACGAAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGT 21544 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || || || || ||||| |||||||||| |||||||| || || ||||| Sbjct 21545 ACGACCATCCTCAAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACC 21604 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||| ||||||||||| ||| |||||| | || || | ||| || ||||| Sbjct 21605 TTCCTTGTCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAA 21664 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||||||| || | ||| |||| ||| | ||||||||| Sbjct 21665 AGTAATCGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 21709 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || ||||| ||||||| ||||| || |||||| Sbjct 21257 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGT 21316 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||| || || ||||||||||| || |||||||| Sbjct 21317 ACGGCCATCCTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGTTGGTCAGGAGGAATACC 21376 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||||||||| ||| ||| || | || |||| || || || || Sbjct 21377 TTCCTTATCTTGGATCTTTTGCTTGACATTTTCAATACTATCAGAGGACTCAACCTCCAA 21436 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| || | || | |||||| Sbjct 21437 GGTAATGGTCTTACCAGTGAGAGTCTTGACAAAGATTTGCAT 21478 >seq686 Length=24674 Score = 172 bits (190), Expect = 1e-37 Identities = 173/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| ||||| ||||||||||| | || ||||| |||||| Sbjct 10770 ACGAAGACGAAGAACCAAGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGT 10711 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || |||||||| || || ||||||||||| || || ||||| Sbjct 10710 ACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACC 10651 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||| ||||||||||| ||| |||||| | || || | ||| || ||||| Sbjct 10650 TTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCAACTTCTAA 10591 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || |||||||| || | ||| |||| ||| | ||||||||| Sbjct 10590 AGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTT 10546 >seq769 Length=21522 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| ||||| ||||| ||||| | || || ||| | || | |||||| Sbjct 14280 AGGACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCGCTTAGGGTACGACCATCT 14221 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| ||||| || |||||||| || || |||||||||||||||||| Sbjct 14220 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 14161 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||||| || ||| ||||| ||||| || | ||| || ||||| || || ||| Sbjct 14160 TGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAATTGTC 14101 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | || | |||||| Sbjct 14100 TTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 14069 >seq80 Length=97372 Score = 136 bits (150), Expect = 9e-27 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||||||||| ||||| ||||||| || || ||| ||| || Sbjct 13653 ACGAAGACGGAGAACTAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGCTCAAGGT 13712 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || || || |||||||| ||||||||||| || |||||||| Sbjct 13713 ACGACCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACC 13772 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGA 225656 |||||||||||| ||||||||||| || || |||||||| || Sbjct 13773 TTCCTTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGA 13817 >seq243 Length=56764 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || ||||| ||||| ||||||| || || ||| | || | |||||| Sbjct 37866 AGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCT 37925 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || || || ||||| ||||| || |||||||| || || |||||||||||||||||| Sbjct 37926 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 37985 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || ||||| || ||| ||||| ||||| || | || || ||||| || ||| || Sbjct 37986 TGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCATC 38045 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | || | |||||| Sbjct 38046 TTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 38077 >seq439 Length=37054 Score = 120 bits (132), Expect = 7e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || ||||| ||||| | |||||||| ||| || Sbjct 23595 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGT 23536 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || || ||||| || || |||||||| || || || ||||| Sbjct 23535 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACC 23476 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAG 225657 |||||| ||||||||||||||||| ||| || |||||||| ||| Sbjct 23475 TTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGAG 23430 >seq175 Length=68572 Score = 120 bits (132), Expect = 7e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || ||||| ||||| | |||||||| ||| || Sbjct 14545 ACGAAGACGGAGAACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGT 14486 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| || || || || ||||| || || |||||||| || || || ||||| Sbjct 14485 ACGACCGTCTTCGAGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACC 14426 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAG 225657 |||||| ||||||||||||||||| ||| || |||||||| ||| Sbjct 14425 TTCCTTATCTTGGATCTTTTGCTTGACATTGTCAATGGTGTCAGAG 14380 >seq83 Length=96909 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || ||||| || || || || || |||||||| ||||||||||| || |||||||||||| Sbjct 41955 CCGTCTTCGAGTTGTTTACCGGCAAAGATAAGACGTTGTTGGTCAGGAGGAATACCTTCC 42014 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGA 225656 |||||||| ||||||||||| || || |||||||| || Sbjct 42015 TTGTCTTGAATCTTTTGCTTGACGTTGTCAATGGTGTCGGA 42055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192507455958476