Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq862 228 8e-55 seq656 221 1e-52 >seq862 Length=17893 Score = 228 bits (252), Expect = 8e-55 Identities = 470/694 (68%), Gaps = 14/694 (2%) Strand=Plus/Minus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || || ||||| || || ||||||||||| || |||| || || || || || Sbjct 17655 ATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGAC 17596 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 |||| ||||| || ||| || ||||||| ||||| || || || | | Sbjct 17595 GGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATAT---C 17539 Query 23463 AATAAC---TTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATC 23519 | || ||||| ||||| | | | || |||| || | ||| ||||| || Sbjct 17538 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 17479 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 | ||| || |||||||| | || ||||||||||| ||||| || || ||||| | Sbjct 17478 AGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAG 17419 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || |||||||| | |||||| || | |||||| || || || ||||| ||||| || || Sbjct 17418 ACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGAC 17359 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 ||| |||||||| ||||||||| | |||| | | ||| | ||||||||||| Sbjct 17358 AGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGA---GGAAATCCATTTGAA 17302 Query 23700 tGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 | ||||| |||||| || | ||| || || ||||| || ||||| | Sbjct 17301 GGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 17242 Query 23760 TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAAT 23819 ||| |||| || ||| | ||||| || ||||| | | ||| || |||| | ||||| Sbjct 17241 TTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 17182 Query 23820 ATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATT 23879 ||||||||| || ||||| ||||| |||||| ||||||||| | | || |||| Sbjct 17181 ATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATC 17122 Query 23880 AAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAG 23939 | |||| ||| | | || ||||| |||||||| ||||| | |||||||||| || | Sbjct 17121 ACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAA 17062 Query 23940 AAC---ATATTTTATAAAATGTCTTTCATCAGTTGATAAT-TTTTTCCAATCATTAATAT 23995 ||| | | | | ||| || | || | | || | |||| |||||||| || | Sbjct 17061 AACGCGAGAGATAAAGAAACGTTCGTTTTC-GGTCATCTTGTTTTCCCAATCATGAAGGT 17003 Query 23996 CTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | || ||||| | ||| ||| |||||||||| Sbjct 17002 CCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAA 16969 >seq656 Length=25916 Score = 221 bits (244), Expect = 1e-52 Identities = 490/731 (67%), Gaps = 22/731 (3%) Strand=Plus/Plus Query 23220 TTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTC 23279 |||||| || ||||| |||| || || || ||||| || | | || || | || Sbjct 485 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 544 Query 23280 CATAAAATCAAATGGATTAGAAGTATTATATACAGCTT------TACATGATAATTCCTT 23333 |||||| ||||||||||| | || || || | ||| | || || | | | Sbjct 545 CATAAAGTCAAATGGATTGGTAGCC--ATGTAAATCTTGTCGAATCCAAGAGCAACCAT- 601 Query 23334 TAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTAT 23393 ||| | ||| || || ||||| || ||||| |||||||| || | || || || || Sbjct 602 ---AAGGCGATCGGCAACGAATTCGATGTATTGGCACATCAAGGCAGAATTCATGCCGAT 658 Query 23394 TAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAAT 23453 || || |||| ||||| || ||| | ||||||| ||||| || || Sbjct 659 GAGAGCAACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGAT 718 Query 23454 TATTTGAACAATAAC---TTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACA 23510 || | | | || ||||| ||||| | | | || |||| || | ||| Sbjct 719 GATAT---CCTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACA 775 Query 23511 TGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCC 23570 ||||| ||| ||| ||||||||||| | || ||||||||||| ||||| || || Sbjct 776 AGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACC 835 Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630 ||||| || || ||||| || | |||||| || | |||||| || || || ||||| || Sbjct 836 AGGCATCAAACCACGTTTCTTGAGCCAAAAAATAGAAGCAAAGGAACCAGAGAAGAAGAT 895 Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAAT 23690 ||| || ||||| |||||||| |||||||| | |||| | | ||| | ||||| Sbjct 896 ACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGA---GGAAAT 952 Query 23691 CCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA 23750 ||| || | ||||| |||||| ||| | ||| || || ||||| || || Sbjct 953 CCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAGGGGATAGTGTCAATAGCAGAAAA 1012 Query 23751 GAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTC 23810 || | ||| |||| ||||||| | ||||| || ||||| | | ||| || |||| Sbjct 1013 TAGCATTTCTTTCTCTTGATTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTC 1072 Query 23811 AGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTG 23870 | ||||| |||||||| || ||||| ||||| |||||| ||||||||| | | Sbjct 1073 TGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTT 1132 Query 23871 AACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAA 23930 || |||| | |||| ||| | | || ||||| |||||||| ||||| | ||||||| Sbjct 1133 GACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAA 1192 Query 23931 GAAAG-CAAGA 23940 ||| | ||||| Sbjct 1193 GAAGGCCAAGA 1203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521477870095600