Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq98 158 3e-33 seq58 147 5e-30 seq80 138 2e-27 seq25 89.7 1e-12 >seq98 Length=79831 Score = 158 bits (174), Expect = 3e-33 Identities = 782/1218 (64%), Gaps = 64/1218 (5%) Strand=Plus/Minus Query 318485 TAATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCT 318544 ||| || |||||||| || ||| | | ||| | || |||| || || ||| || Sbjct 36739 TAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCAAGAGACT 36680 Query 318545 CGCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCATAGA 318603 | || || | | ||||| |||||||| | ||| | || ||| ||| |||| ||| | | Sbjct 36679 CACGATCCAAATAATTGGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCACATA 36621 Query 318604 GCAGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGA 318663 ||||| ||||| |||||||| | ||||| || ||||| |||||||| || ||||| ||| Sbjct 36620 GCAGCACCAATGACCAATTTGACTTTTTGACCACCAGAGAGACCACGGATACGAGAGTGA 36561 Query 318664 GTTGTAAATTCAGGGTCGAGCCCAACATTTGCCATATGTTCTTCCACGTTCTTTGCGGTC 318723 || | ||||| || || || ||||| | |||| || | ||| | | ||| || ||| Sbjct 36560 GTAGCGAATTCGGGTTCAAGACCAACTTCGGCCAAGTGCTTTTCAATTTCCTTGGCAGTC 36501 Query 318724 AGTGGC---TTGA-ACATACCATTTGCAACGGCTTCTTTGGTATCAATATCGTTCAGAAG 318779 | || |||| || | | || ||| ||||| | ||| | ||||| | Sbjct 36500 AAAGGACGGTTGAGACCCATC-TTGGCA---GCTTCAGCAGCATCTAC----TTCAGCAA 36449 Query 318780 TTTTC---CGAAACCATACTCCTCCAGGCGTTCG--CGGGACATCCATTGGGTAGTCTCA 318834 | ||| | ||| | | | || || || || | || || ||||| ||| | ||| Sbjct 36448 TCTTCTTACCAAAACCCATTTCTTCAAGC-TTGGAACGAGAGATCCA---GGTGTTGTCA 36393 Query 318835 TC-GTTTTTCCACTGAACC--------TCGTACTCGTAAGATTTTTTCAGCTTGCGGCGA 318885 | | | || || || || || ||||| |||| || ||||| || ||| Sbjct 36392 ACAGAGGAGCGACCGACCCAAGAGACTTCATATTCGTAGGATTGCTTGAGCTTACGACGA 36333 Query 318886 CCAAGAATCTTGTCAAGAA-----TTTTC---TTCACTCCGTCAACGACTTTAGTGTCAT 318937 |||| ||| |||| || ||||| |||| || ||| ||||| || | Sbjct 36332 CCAACAATAGCTTCAACAACACGCTTTTCACCTTCAATCA--CAAAGACTT----GT--T 36281 Query 318938 ACATCTTCTTTAGTTCTTCTTCGTTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTTTG- 318996 ||| |||| | | ||||||| ||| || | | | | | || |||| Sbjct 36280 CCATGGCCTTTTGGTTTTCTTCGGCGTTGTTAC--GTTCGTTCTTTTCGAGT-TCTTCAC 36224 Query 318997 --TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGAT 319054 |||||||||| | ||||||||||| || || | |||||| || |||| | ||| Sbjct 36223 GATCTTCACCGGTGTGGTAACGCCATTGAATGTATTCGTTGGGAGTTTTGTCCAAGTGAC 36164 Query 319055 CCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCC 319114 |||||||||||||||||||| || || ||||| |||| ||||| || ||||| ||| Sbjct 36163 GTTCGATGTGGTGGAAAGCATGTTGAGCGACGTAGGCAATACGCAAGTTAGGATGTCTCC 36104 Query 319115 AAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCC 319174 | ||| |||| | | ||| |||| || || | || ||| || | ||| || | Sbjct 36103 AGACAGTACCAACCTCAGATTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTAC 36044 Query 319175 CCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATTCACGT 319234 | |||||||| || | || | | | ||| || || || | |||| | | Sbjct 36043 CAGCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATGGA-GA 35987 Query 319235 TGTCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCA 319291 | |||| | | | || || | ||| || || | ||| | || | ||||| Sbjct 35986 TATCAATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTCA 35927 Query 319292 TGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACG 319351 ||| ||||| ||||| | ||||||| || | ||| || || || ||||| || Sbjct 35926 AGATAGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGTTCAGGGAAAGAGAACT 35867 Query 319352 TGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACT 319411 || | | || | | || ||||||| || | ||| |||||| ||||| | Sbjct 35866 TGATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGAACCTTCTTGACGAATT 35807 Query 319412 CGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGG 319471 |||||| || ||||| || ||| ||||| ||| |||||||| || || || || Sbjct 35806 CGGACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGTTCGTAGTGAATGATGTCGG 35747 Query 319472 TGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAA 319531 || ||| ||| | ||| || |||||||| || ||||| | | | | ||| ||| | Sbjct 35746 AACAGACATGGTCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAGTCTTCA 35687 Query 319532 GGTTGATCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGC 319590 | ||||| | |||||| ||||| ||| ||| | || ||||| || Sbjct 35686 AACCAAGGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGT 35628 Query 319591 TCGT-CAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 319649 |||| ||| ||| || | | ||||||| ||||| ||||| |||||||| || ||||| Sbjct 35627 TCGTCCAACAAG-AGGATATCAGCGTTCATCAGCATAGCACGGGCAAGAGCAAGCTTCAT 35569 Query 319650 TTTCCACCCTCCGGAAAG 319667 ||||| || || || || Sbjct 35568 CTTCCAACCACCAGAGAG 35551 >seq58 Length=110453 Score = 147 bits (162), Expect = 5e-30 Identities = 782/1221 (64%), Gaps = 70/1221 (6%) Strand=Plus/Minus Query 318485 TAATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCT 318544 ||| || |||||||| || ||| | | ||| | || |||| || || ||| | Sbjct 27564 TAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCAAGAGATT 27505 Query 318545 CGCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCATAGA 318603 | || || | |||| || |||||||| | ||| | || ||| ||| |||| ||| | | Sbjct 27504 CACGATCCAAATAGTTAGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCACATA 27446 Query 318604 GCAGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGA 318663 ||||| ||||| ||||| || | |||||| || ||||| |||||||| || ||||| ||| Sbjct 27445 GCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACGAGAGTGA 27386 Query 318664 GTTGTAAATTCAGGGTCGAGCCCAACATTTGCCATATGTTCTTCCACGTTCTTTGCGGTC 318723 || | ||||| || || || ||||| | |||| || | ||| | | ||| || ||| Sbjct 27385 GTGGCGAATTCGGGTTCAAGACCAACTTCAGCCAAGTGCTTTTCAATTTCCTTGGCAGTC 27326 Query 318724 AGTGGC---TTGA-ACATACCATTTGCAACGGCTTCTTTGGTATCAATATCG--TTCAGA 318777 | || |||| || | | || ||| ||||| | || |||| ||||| Sbjct 27325 AAAGGACGGTTGAGACCCATC-TTGGCA---GCTTC------AGCAGCATCGACTTCAGC 27276 Query 318778 AGTTTTC----CGAAACCATACTCCTCCAGGCGTTCG--CGGGACATCCATTGGGTAGTC 318831 | | ||| ||||||| | | || || || || | || || ||||| ||| | Sbjct 27275 AATCTTCTTACCGAAACCC-ATTTCTTCAAGC-TTGGAACGAGAGATCCA---GGTGTTG 27221 Query 318832 TCATC-GTTTTTCCACTGAACC--------TCGTACTCGTAAGATTTTTTCAGCTTGCGG 318882 ||| | | | || || || ||||| ||||| |||| || ||||| || Sbjct 27220 TCAACAGAGGAGCGACCGACCCAAGAGACTTCGTATTCGTAGGATTGCTTGAGCTTACGA 27161 Query 318883 CGACCAAGAATCTTGTCAAGAA-----TTTTC---TTCACTCCGTCAACGACTTTAGTGT 318934 ||||||| ||| |||| | ||||| |||| || ||| ||||| || Sbjct 27160 CGACCAACAATAGCTTCAACGACACGCTTTTCACCTTCAATCA--CAAAGACTT----GT 27107 Query 318935 CATACATCTTCTTTAGTTCTTCTTCGTTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTT 318994 | || |||| | | ||||||| ||| || | | | | | || |||| Sbjct 27106 --TCCAAGGCCTTTTGGTTTTCTTCGGCGTTGTTAC--GTTCGTTCTTTTCGAGT-TCTT 27052 Query 318995 T---GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGAT 319051 ||||||||||| | |||||||||||||| || | |||||| || |||| | | Sbjct 27051 CACGGTCTTCACCGGTGTGGTAACGCCATTGGATGTATTCGTTGGGAGTTTTGTCCAAGT 26992 Query 319052 GATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCT 319111 || |||||||||||||||||||| || || ||||| |||| ||||| || ||||| Sbjct 26991 GACGTTCGATGTGGTGGAAAGCATGTTGAGCGACGTAGGCAATACGCAAGTTAGGATGTC 26932 Query 319112 TCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTT 319171 |||| ||| |||| | | ||| |||| || || | || ||| || | ||| | Sbjct 26931 TCCAGACAGTACCAACCTCAGATTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACT 26872 Query 319172 TCCCCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATTCA 319231 | || |||||||| || | || | | | ||| || || || | |||| | Sbjct 26871 TACCAGCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATGGA 26814 Query 319232 CGTTGTCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCT 319288 | | || | | | | || || | ||| || || | ||| | || | || Sbjct 26813 -GATATCGATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCT 26755 Query 319289 TCATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCC 319348 ||| ||| ||||| ||||| | ||||||| || | | | || || || ||||| Sbjct 26754 TCAAGATAGCACGTTCCTTAGTCTTGATACCTTCCAAGTAACCAGGTTCAGGGAAAGAGA 26695 Query 319349 ACGTGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGA 319408 || || | | || | | || ||||||| || | ||| |||||| |||| Sbjct 26694 ACTTGATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGAACCTTCTTGACGA 26635 Query 319409 ACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAG 319468 | || |||| || ||||| || ||| ||||| ||| |||||||| || || || Sbjct 26634 ATTCAGACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGTTCGTAGTGAATGATGT 26575 Query 319469 AGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCT 319528 || || ||| ||| | ||| || |||||||| || ||||| | | | | ||| || Sbjct 26574 CGGAACAGACATGGTCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAGTCT 26515 Query 319529 TAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTC 319587 | | | ||||| | |||||| ||||| ||| ||| | || ||||| Sbjct 26514 TCAAACCAAGGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTGGTA 26456 Query 319588 GGCTCGT-CAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTT 319646 || |||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || || Sbjct 26455 GGTTCGTCCAACAAG-AGGATATCAGCGTTCATCAACATGGCACGGGCAAGAGCAAGCTT 26397 Query 319647 CATTTTCCACCCTCCGGAAAG 319667 ||| ||||| || || || || Sbjct 26396 CATCTTCCAACCACCAGAGAG 26376 >seq80 Length=87281 Score = 138 bits (152), Expect = 2e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGA 230486 || ||| |||| ||||| || || ||||||||| ||| | ||| | ||||||||||| Sbjct 44453 GATGCTCTTCCC-GTCGCTCTCATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGA 44395 Query 230487 ATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAA 230546 |||||| || || || | | ||||| ||||| | ||| || | |||| ||| || Sbjct 44394 ATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTACCAA 44335 Query 230547 CCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCG 230606 || |||| |||||||| | || || |||||||| |||||||||||||| |||||||| Sbjct 44334 TCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCG 44275 Query 230607 TGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 |||| ||| ||||| | ||||||| ||||| Sbjct 44274 TGTCTCTGATTATCAACGTGCTGGTGTCATGAA 44242 >seq25 Length=151245 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055 ||||||||| | ||||||||||| || ||||| | ||| || ||| | || | || | Sbjct 145367 GTCTTCACCAGTAGCATAACGCCACTGAATATATTCGTTTGGCGTCTTATCCAAGTGCTG 145426 Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115 |||||||| ||||| || || || || || || |||| ||| | ||| ||||||||||| Sbjct 145427 TTCGATGTGATGGAAGGCGTGTTGAGCAACATAGGCAATACGTAAATTGGGATGCTTCCA 145486 Query 319116 AACACTACC 319124 || |||| Sbjct 145487 CACCGTACC 145495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057815935744850