Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq80 152 5e-32 >seq80 Length=87281 Score = 152 bits (168), Expect = 5e-32 Identities = 430/651 (66%), Gaps = 21/651 (3%) Strand=Plus/Plus Query 16675 TTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTC 16734 ||| ||||| || || ||||| || ||||| || ||||| | ||||| || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 16735 CATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||| || ||||| ||||| ||||| || |||| || | || | || || | | || Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAAT--CCAAGAGCAACCATG 44376 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | | ||| || || ||||| || || || ||||| || | ||||||| || || ||| Sbjct 44377 AGACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGA 44436 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || |||||||| |||||||||||| ||| || || || |||||| || ||| Sbjct 44437 GCGACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATA 44496 Query 16913 --CTAGCAACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACAT 16966 || | || ||||| || ||||| | || | |||||| |||| | ||||| Sbjct 44497 TCCTTG--ACGCGTTCTTGGCTAGGACGCT-TACG---AAGATGGGTAAATAAAAGACAA 44550 Query 16967 GCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCG 17026 || || || ||| | || || || | | ||| | ||| || |||||||| ||| Sbjct 44551 GCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCG 44610 Query 17027 GGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATA 17086 |||||| || ||||| || | |||||| || | || || || ||||| ||||| ||| Sbjct 44611 GGCATCAGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATA 44670 Query 17087 CCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACG-AAT 17145 || ||||| | ||||| || | | ||||| || | | || || | | | ||| Sbjct 44671 CCTTCGACAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCG--TTAG--AGGAAAT 44726 Query 17146 CCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 |||||| |||| || || ||| ||| || ||| || || || || || ||| Sbjct 44727 CCATTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAA 44786 Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 | | ||||| || || ||| | ||||| || || || | || ||||| |||| Sbjct 44787 GAGCATTTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTC 44846 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 | ||| || || || || || ||||| || || || ||| ||||| Sbjct 44847 TGCGTGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTC 44897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541750754600