Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq9 199 3e-46 >seq9 Length=217876 Score = 199 bits (220), Expect = 3e-46 Identities = 419/625 (67%), Gaps = 26/625 (4%) Strand=Plus/Minus Query 101678 TTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCT 101737 ||||| || |||| ||||| ||||| | || | ||| || || ||||| || || || Sbjct 9111 TTAAGTGCGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCA 9052 Query 101738 CCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATG 101797 ||||| | |||| || ||||| |||||||||| || ||||| | ||| ||||| Sbjct 9051 CCAGGATCAAGATCTGTTACATGCGCAATCATGCGTGTCAAAAGTGCATAAGAGGCAATA 8992 Query 101798 TTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTT 101857 || || || || || | ||||||||| || | |||||| || ||| || | ||| Sbjct 8991 TTGAAAGGAACACCCAGTCCCATATCACAAGAACGTTGATAAAGCACACAAGACAACTTG 8932 Query 101858 ---------CCATC------------ACAGACATAAAATTGACTTAATACATGACAAGGC 101896 ||||| | | ||||||||||||| || ||||||||||| Sbjct 8931 GCACGTCCGCCATCCTGAGGTGGATTAGATACATAAAATTGACAAAAGGCATGACAAGGC 8872 Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956 || || |||| ||||||| |||| | ||||| || ||| | || || | ||| Sbjct 8871 GGTAAAGCCATGATAGGAATATCTGCAGGGTTCCATGCTGACAGAATGATTCTGCGATCA 8812 Query 101957 GTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTTA 102016 ||||| || |||||||||| || |||| |||| |||||| |||| |||| ||| || Sbjct 8811 GTAGGATTGTTTTTTATAGTGTCGATCACTTGTTGTAATTGATCAATGCCTTGCCCTGTA 8752 Query 102017 TAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACA 102076 ||||| || | | |||| || || || || ||||| |||||||| || || Sbjct 8751 TAATCAGTATCACAATCAACGTATTTGGCACCAAAGTGTCTCCATTGAAATCCGTAGACT 8692 Query 102077 GGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGAT 102136 ||||||||||| |||||| | || | |||||| | || || | | || | ||| Sbjct 8691 GGTCCAAGATCACCTTCACGACGGTGAGTAAAACCTAACTTGTCGAGATATTCGCGAGAA 8632 Query 102137 CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCT-CTTTGCTGTCAGTAGATCC 102195 || || |||||||||| | || | | ||| | ||||| || ||| ||| Sbjct 8631 CCGTTGCCATCCCAAATCTTGACATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCTCC 8573 Query 102196 TCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAA 102255 | | || ||||| | ||||||||| | ||||| || | ||||| | ||| || || | Sbjct 8572 TTTAATGAACCAAAGCAGTTCTTCCAAGACACCCCTGAAGAATACACGCTTTGTTGTCAG 8513 Query 102256 AAGTGGAAAT---TCATTTTCTAAA 102277 ||||||||| |||| || |||| Sbjct 8512 GAGTGGAAATATATCATCTTTTAAA 8488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361248580364345