Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq15 497 1e-135 seq80 233 2e-56 >seq15 Length=177086 Score = 497 bits (550), Expect = 1e-135 Identities = 1388/2114 (66%), Gaps = 38/2114 (2%) Strand=Plus/Minus Query 52838 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTT 52897 ||||| || || ||||| || || |||| || ||| || ||||| |||||||| Sbjct 94318 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTG 94259 Query 52898 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 52957 || || || | | | || || || ||| ||| |||| | ||||||||| || || Sbjct 94258 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 94199 Query 52958 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 53017 | || || | || |||||||| | ||||| || ||| | |||||||| | || Sbjct 94198 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTC 94139 Query 53018 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATAGATCCACCATCT 53074 || || | || | || | | ||| | | | | |||||||||||||| || || Sbjct 94138 TTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCA 94079 Query 53075 ACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 53134 |||| ||| ||||||| | || |||||||| | | || || | | | ||| Sbjct 94078 GCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGT 94019 Query 53135 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 53194 | ||||| || | |||| |||| || || | || | || ||||||| || Sbjct 94018 AACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGAT 93959 Query 53195 GTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 53254 || || ||||| | | | ||||| || | ||||||| ||| || ||||| |||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 53255 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTT 53312 || || |||| | | || | | ||| ||| | | || || || || || | Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACC--ATGCTTGGCAATCTTTTCCTTGAGTGCGG 93841 Query 53313 CCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTAC 53372 |||| | |||||||| | ||| || ||| || ||||| || Sbjct 93840 CCCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTT-- 93783 Query 53373 TGGCGTAC---GAT-CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAA 53428 | ||| | | ||| |||| || ||||| ||||| | ||| ||||| | || ||| Sbjct 93782 --GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 93725 Query 53429 CTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CTTGTGC 53487 || || || ||| | | || |||||||| ||||| | | || | | |||| || Sbjct 93724 GAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 93666 Query 53488 TTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACC 53547 ||| | ||| ||||||||| | | || || | ||| ||||| ||||||||||| Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 53548 AATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATT 53607 | ||| || |||||||||||||| || || |||| ||||| | |||||| ||||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATT 93546 Query 53608 AATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAG 53667 ||||| || || || || | |||||| || || ||| ||||| | |||||| | Sbjct 93545 GATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 93486 Query 53668 AAAATCAAA---TTGTCCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACA 53724 |||||| | || || || || ||| | | | ||||| || |||| ||||| Sbjct 93485 GAAATCATACTTTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACA 93426 Query 53725 AACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 53784 || || || |||| || | | |||| | || || || || || || || ||||| Sbjct 93425 GACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTT 93366 Query 53785 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 53844 ||| || || || ||||| |||||||||||| ||||||| ||||||||||| || ||||| Sbjct 93365 GATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAA 93306 Query 53845 TGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTAT 53904 ||| ||||||| || | || | || | ||| || | ||| | ||||||| || Sbjct 93305 TGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGAT 93246 Query 53905 TATAGATTTGTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCT 53962 | | | | || ||||| ||| | ||||||| | ||| | |||| ||||| Sbjct 93245 TGTT--TCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCA 93188 Query 53963 CCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCA 54022 ||||| || | | ||||||||| ||||| || || | | ||||| || || | Sbjct 93187 CCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCG 93128 Query 54023 TCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 54081 || | || || | ||| || |||||||||| ||| ||||| ||| || ||||| | | Sbjct 93127 TCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACGAGC 93069 Query 54082 TCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 54141 ||| ||| || || || || ||| | || | || | | ||| || | ||| Sbjct 93068 TCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATG 93009 Query 54142 CCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTA 54201 ||| ||||||||||| || | | | || || || || || || || ||||| | || Sbjct 93008 CCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATA 92949 Query 54202 TCTAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCATTGGATGCACCATTGG 54260 | ||| || || || |||| | | ||| || |||||| || ||||| ||| |||| Sbjct 92948 ACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGTTGG 92890 Query 54261 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTG 54320 | |||| || || |||||| |||||||| || ||| | || || || |||| Sbjct 92889 TGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTG 92830 Query 54321 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 54380 | | || |||||| || || ||| | ||| |||||||| || || || ||| | Sbjct 92829 CTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTT 92770 Query 54381 CCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 54440 || ||||| | || | ||||| |||||||||| ||||| || || |||||||||| Sbjct 92769 CCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATA 92710 Query 54441 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTG 54500 | |||||| |||||| ||||| || ||||||| | | ||||| ||||| ||||||| Sbjct 92709 AAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTG 92650 Query 54501 AGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTT 54560 || ||||| | ||| || || | || |||||||| | || || ||||| | || Sbjct 92649 CATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTT 92590 Query 54561 CAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 54620 || | |||||| || || || || | ||| || || | ||||| |||||||| Sbjct 92589 CAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAGA 92530 Query 54621 AGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTT---GAGTTTATCCTTATA 54675 ||||||| ||||| || || || || || ||| | ||||| | | | | | |||| Sbjct 92529 AGTTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTTATC 92472 Query 54676 TTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 54735 || || || | || | | || || || || || ||||| || | || || Sbjct 92471 CATG---ACGACTTTGTACGTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGGG 92415 Query 54736 ATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTG 54795 ||| ||||| || | || || | || |||| | ||| | ||||| ||||| ||||| Sbjct 92414 ATTCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTG 92355 Query 54796 TAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACA 54855 ||||| || | ||| || | || || | | |||||||| ||||| | || || Sbjct 92354 AAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCAT 92295 Query 54856 AGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATAT 54915 | || ||| |||| || | || | || | ||| || ||||| || || | |||| Sbjct 92294 ATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTATAC 92235 Query 54916 TCCTTGGATAACCT 54929 || |||||||| Sbjct 92234 ACCAGAGATAACCT 92221 Score = 107 bits (118), Expect = 2e-18 Identities = 276/420 (66%), Gaps = 3/420 (1%) Strand=Plus/Plus Query 52846 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTT 52905 ||| ||||| || || ||||| || |||| | ||||| |||||| || ||||| Sbjct 131511 ATAATACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAGTTT 131570 Query 52906 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 52965 | | | | || || || || | ||||||||||||| ||| || || |||||||| Sbjct 131571 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGGCTCC 131630 Query 52966 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAAC 53025 ||||| || ||||| | || || || |||||| ||| ||||| | || || || | Sbjct 131631 TCTGTCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTCTTGTATAG 131690 Query 53026 TCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAAT 53082 || | ||| || |||| | | || || ||| ||||||| | || || Sbjct 131691 CTTTTTGAGATCATCAGGAATGCCAGGAATACGTTGGATACTACCACCATGAGCGATCAT 131750 Query 53083 CCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGG 53142 | | |||||||| | |||||||||||| || | | | | || | |||| | Sbjct 131751 CATGTTCTTGATGTTATCATTCCATAAACCGAGTTCAATGAGGTCATTCAGTAAATGCTG 131810 Query 53143 ATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGG 53202 || |||| ||| ||||| ||| || | || || |||||||| || || || || Sbjct 131811 GTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAGG 131870 Query 53203 TTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCAC 53262 || | | || ||||| ||||| |||||| ||| ||||| |||||||| || || Sbjct 131871 CTCAAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAAC 131930 >seq80 Length=87281 Score = 233 bits (258), Expect = 2e-56 Identities = 566/848 (67%), Gaps = 13/848 (2%) Strand=Plus/Plus Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAA 23965 ||| || || ||||||||||| | | || || | | ||||| | || || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 23966 TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 24025 | ||| || || || || || || ||||| || | ||||| || || || Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 24026 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 24085 || |||||||| | || | ||||||||||||||| ||| || || || ||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 24086 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 24144 | || ||||| || || | | || | | ||| |||| | | ||| || || | Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 44557 Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204 | || ||||| || || | || || ||||| ||| || || | |||||||| | Sbjct 44558 CAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCA 44617 Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 24264 | ||||| ||||| |||||||| ||||| ||||| || ||||| ||||| || ||||| | Sbjct 44618 GACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGA 44677 Query 24265 CTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGA- 24323 | || |||||||||| ||| | ||| || || || | ||||| ||||| Sbjct 44678 CAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGAGGAAATCCA--TTTGAA 44735 Query 24324 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 24382 |||||||| ||||| | || | |||||| || || || |||||| |||||| | Sbjct 44736 GGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 44795 Query 24383 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 24442 ||| || | | ||||| | ||| || |||||||||||||| || |||| | ||||| Sbjct 44796 TTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 44855 Query 24443 GTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTAT 24502 |||||||| |||||||| || ||||||||| |||| || | ||||| ||||| Sbjct 44856 ATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATC 44915 Query 24503 ACAAAATCGTTCTG--CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 24560 |||||| ||| || | || |||||||| || || || || | ||||| || ||| Sbjct 44916 ACAAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCC 44973 Query 24561 AATACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATA 24617 || || | ||||| | ||||| | ||| | | || | |||||||| | Sbjct 44974 AAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGG 45033 Query 24618 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 24677 || || | ||| | |||||| |||||||||| || || || || || ||||| | Sbjct 45034 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAAT 45093 Query 24678 TTCCAGAT 24685 | |||||| Sbjct 45094 TGCCAGAT 45101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593717184195600