Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 1e-13 seq57 87.8 2e-12 >seq10 Length=205532 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017 |||||||||||| ||| | || || | || ||||| || ||||| ||| ||| | Sbjct 110216 AAAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATC 110275 Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077 | || | | | || | |||||||| ||| || || |||||| | || || Sbjct 110276 TTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGA 110335 Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137 ||||| |||||||||||||| || |||||||| || ||| ||| || || || Sbjct 110336 CCAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTA 110395 Query 29138 CAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||| || || ||||||||||| |||||| |||| Sbjct 110396 CAACATCCAAAAGGAATCTACCCTTCACTTGGT 110428 >seq57 Length=110979 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || |||| ||| | || || || || ||||| ||| || | | Sbjct 11440 ATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCT 11381 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | || ||||||||| || || |||||| | || |||||| Sbjct 11380 GACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 11321 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | || |||||||| || |||||||| |||||| || | ||| | ||| || | Sbjct 11320 CAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAG--CGACTATA 11263 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGT 29170 | || || ||||||||||||||||| |||| Sbjct 11262 ACATCCAAAAGGAATCTACTCTTCATTTGGT 11232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428332893894725