Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 1e-14 seq57 89.7 4e-13 >seq10 Length=205532 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || || |||||||| ||||| ||||| || || | | ||||| || ||||| || Sbjct 110416 GTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCAAGTTGTTTACCA 110357 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | ||||||||||| ||||| || | ||||||||||| |||||||| || Sbjct 110356 GCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGAATCTTTTGCTTG 110297 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | ||| | ||||| | || ||| | ||||| ||||||||||| | || Sbjct 110296 ACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTGCCGGTAAGAGTC 110237 Query 21159 TTGACAAATATTTGCATTTT 21178 || || || ||||||||||| Sbjct 110236 TTTACGAAGATTTGCATTTT 110217 >seq57 Length=110979 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | ||| || |||||||| ||||||||||| ||||| | | || Sbjct 11229 AGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCT 11288 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || || ||||| || ||| | || || | || || || || | ||||||||||| Sbjct 11289 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 11348 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || |||||||| || | | ||| ||| ||| | ||| ||| | ||||| ||| Sbjct 11349 TGAATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCGTC 11408 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || |||||||| |||||||| Sbjct 11409 TTTCCAGTAAGTGTCTTGACAAAGATTTGCAT 11440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256137961020