Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq9 147 2e-30 >seq9 Length=217876 Score = 147 bits (162), Expect = 2e-30 Identities = 425/653 (65%), Gaps = 27/653 (4%) Strand=Plus/Minus Query 97000 TTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGT--AAGCTGCTCTGTGAGAGCATCAATGT 97057 |||| || ||||||||| |||| ||| ||| || ||| | | || || |||| | Sbjct 9153 TTTAAAGTAGGGAAAGGCTTGGG--TTCACGTTGAATCTGTTGCTTAAGTGCGTCAAGAT 9096 Query 97058 GATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG 97117 ||| |||||||| || | ||| || | || || || ||||| |||||| | | ||| | Sbjct 9095 GATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGATCAAGATCTG 9036 Query 97118 TGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTA 97177 | ||||| || ||||| | || || || | ||| ||||| || ||||| || || | Sbjct 9035 TTACATGCGCAATCATGCGTGTCAAAAGTGCATAAGAGGCAATATTGAAAGGAACACCCA 8976 Query 97178 GTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTT---------CCATC-- 97226 ||||||||||| || | |||||| | | ||| || | ||| ||||| Sbjct 8975 GTCCCATATCACAAGAACGTTGATAAAGCACACAAGACAACTTGGCACGTCCGCCATCCT 8916 Query 97227 ----------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTG 97276 | | |||||||| |||| || ||||||| || || || ||||| | | Sbjct 8915 GAGGTGGATTAGATACATAAAATTGACAAAAGGCATGACAAGGCGGTAAAGCCATGATAG 8856 Query 97277 GAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTA 97336 ||| |||| ||||| || ||| | ||||| | ||| || || || | | || Sbjct 8855 GAATATCTGCAGGGTTCCATGCTGACAGAATGATTCTGCGATCAGTAGGATTGTTTTTTA 8796 Query 97337 TGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGAC 97396 | || | || | || | ||||||||||| ||||| || ||||| | | | Sbjct 8795 TAGTGTCGATCACTTGTTGTAATTGATCAATGCCTTGCCCTGTATAATCAGTATCACAAT 8736 Query 97397 CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTT 97456 | |||| || ||||| || |||||||| ||||| || || |||||||| || |||| Sbjct 8735 CAACGTATTTGGCACCAAAGTGTCTCCATTGAAATCCGTAGACTGGTCCAAGATCACCTT 8676 Query 97457 CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAA 97516 | | | | ||||| | ||| || | ||| | ||| || || ||||||||| Sbjct 8675 CACGACGGTGAGTAAAACCTAACTTGTCGAGATATTCGCGAGAACCGTTGCCATCCCAAA 8616 Query 97517 TGTGCACACCAGATGCTGCAAGCT-CTTTGCTGTCAGTAGATCCTCTGATAAACCACAAC 97575 | | ||| | | || | ||||| || ||| |||| | || ||||| | | Sbjct 8615 TCTTGACATTTCTTTCACTTAGATGCTTTG-AGTTTGTATCTCCTTTAATGAACCAAAGC 8557 Query 97576 AATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAA 97628 | |||||||| ||||| || | ||||| | ||| ||||| | ||| ||||| Sbjct 8556 AGTTCTTCCAAGACACCCCTGAAGAATACACGCTTTGTTGTCAGGAGTGGAAA 8504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346781485274150