Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq9 179 3e-40 >seq9 Length=217876 Score = 179 bits (198), Expect = 3e-40 Identities = 401/601 (67%), Gaps = 31/601 (5%) Strand=Plus/Plus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||||| || || ||| | || || || || ||||||||||||||||| ||||| || Sbjct 8667 ACCGTCGTGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCA 8726 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||| ||||| | || ||||| || ||||| | |||||||||||| | || | Sbjct 8727 AATACGTTGATTGTGATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGA 8786 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 | | || |||| || || | || | ||||| ||| | | || |||||| || Sbjct 8787 TCGACACTATAAAAAACAATCCTACTGATCGCAGAATCATTCTGTCAGCATGGAACCCTG 8846 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 |||| | ||| | |||||||| || || |||||| | || |||||||| || ||| Sbjct 8847 CAGATATTCCTATCATGGCTTTACCGCCTTGTCATGCCTTTTGTCAATTTTATGTATCTA 8906 Query 20447 ATA---------ATG------------AATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||| | ||||| ||| | |||||||| || || Sbjct 8907 ATCCACCTCAGGATGGCGGACGTGCCAAGTTGTCTTGTGTGCTTTATCAACGTTCTTGTG 8966 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||||||||||||||||||||||||||| |||||| || | || ||||||| Sbjct 8967 ATATGGGACTGGGTGTTCCTTTCAATATTGCCTCTTATGCACTTTTGACACGCATGATTG 9026 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| |||||| | | | ||||| || | || || || || || | ||| ||| Sbjct 9027 CGCATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTT 9086 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAA 20665 | | ||||| | || | | || |||| | ||| |||| || | ||||| | Sbjct 9087 ATGTGGATCATCTTGACGCACTTAAGCAACAGATTCAACGTGAACCCAAGCCTTTCCCTA 9146 Query 20666 CTCTTCGCATTACTCGAACTGTTAA--AGATATTAACGAT--TTTAAAG-CTGATGATTT 20720 || | | | || ||| || || ||||| || |||| ||| ||| ||| ||||| Sbjct 9147 CTTT----AAAAATC-AACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTT 9201 Query 20721 TGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATAT 20780 ||||||||| || ||||| || | | ||| |||| |||||||||| ||||| || Sbjct 9202 TGTGTTAGAGAACTACAATCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAAAT 9261 Query 20781 A 20781 | Sbjct 9262 A 9262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399181105292275