Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq15 298 5e-76 seq80 161 9e-35 seq10 127 2e-24 seq57 118 9e-22 >seq15 Length=177086 Score = 298 bits (330), Expect = 5e-76 Identities = 999/1544 (65%), Gaps = 29/1544 (2%) Strand=Plus/Minus Query 22454 TTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGT 22513 || |||| |||| | || || || | || || || ||||| |||||||||| | ||| Sbjct 94009 TTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGATGTGTAAGGT 93950 Query 22514 TCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAAC 22573 || ||| |||||||| || || || |||| || || || || ||||| || || | | Sbjct 93949 TCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGCAACC 93890 Query 22574 AGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCAC 22633 || || ||||| | | || ||||| | ||| || |||||| | ||||||||| Sbjct 93889 AGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGCCCAGTCCCAA 93830 Query 22634 AGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCA--ACACGCCGCGACTCGCCG 22691 |||| || || || ||||| |||||| |||||||||| | || | || | | Sbjct 93829 AGATTGGTAGGTGTGACATT---CCACATGTCGTATTGCAGGATACCCTTGGATACA--G 93775 Query 22692 GGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCA 22751 |||||||||| || |||||||| || ||||| | | || | ||||| || |||| Sbjct 93774 GGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAAGAGGCTTCCA 93715 Query 22752 ACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACG 22807 | || | | || || || || ||||||| ||||||| | ||| || || Sbjct 93714 AGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTCTGGTGAA- 93656 Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 ||| | || ||| | || ||| | ||| || | ||| ||||| |||| ||| Sbjct 93655 ---TCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACCTAAACCA 93599 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCG 22927 ||||||| | | || || || || || ||| | |||||| |||| ||| Sbjct 93598 ATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATTGATATCA 93539 Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987 || | ||||||||||||| || | || || || | | || || Sbjct 93538 ATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGGAAATCA 93479 Query 22988 TAAACGCC-CGATTGTACAACAAACTT--GTTGACGGCGATCGAGGCAAGATTGCATACG 23044 || | | |||| || || | | || || || || ||||| | || || || Sbjct 93478 TACTTTTCTCTATTGATCA-CATAGGTAGGTAGA--GCAATGGAGGCCAAGTTACAGACA 93422 Query 23045 GCCACCTCGTCTTTGGACGTG--TACTCTACAATTTCGGTACATAGATTGCTACACTTTA 23102 || || || || |||| || || || |||||||| ||||| || ||||| ||||| | Sbjct 93421 GCGACTTCATCA--GGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTTGA 93364 Query 23103 TCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACG 23162 |||| ||||| || ||| || || |||| || || | |||||| ||||| ||| | | Sbjct 93363 TCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAATG 93304 Query 23163 GCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACAC 23222 | | || ||||| || | ||| | || || ||||| | ||||| | | Sbjct 93303 GATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATT- 93245 Query 23223 GTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCG 23281 || | | | || ||||| ||||| |||| || | || |||||||| |||| Sbjct 93244 GTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCACCC 93185 Query 23282 TAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTT 23341 | || | || || | || | || || | ||| ||| || | | Sbjct 93184 CAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCA-ATCACCACCGTC 93126 Query 23342 TCA-ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCG 23400 || || || ||| |||||||| || | ||| ||||| |||||||| || || || | Sbjct 93125 TCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCACGAGCTCT 93066 Query 23401 CACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCA 23460 | || ||||| || ||| ||| ||| || |||||| || | ||| |||||||| Sbjct 93065 GATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCCA 93006 Query 23461 CGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACG 23520 || || | ||| | || || |||||||| | |||||| ||||| |||||||| ||||| Sbjct 93005 GGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAACG 92946 Query 23521 GGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCC 23580 ||||| |||||| | || | ||||| |||| | |||||||| ||| ||| Sbjct 92945 AGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAGTAACCGTTGGTGCC 92886 Query 23581 CGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 || | || || | || |||| |||||||| || || || || || || | | Sbjct 92885 GGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTGCTGT 92826 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 || || || || || ||| || || || ||||| || ||||| || || || Sbjct 92825 CTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCCTT 92766 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | || ||||||||| ||||||||||| | || || | || || | || Sbjct 92765 CATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATAAAGT 92706 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || || ||||| |||||||||| | ||||| | ||||| || || || || ||||| Sbjct 92705 AGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTGCATC 92646 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 ||| || ||| || |||||||| || || ||||| |||| | |||||| | || | Sbjct 92645 AATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTTCAGC 92586 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | ||||| ||| |||| || || ||||| | | ||||| || ||||| ||| Sbjct 92585 AATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAGAAGTT 92526 Query 23941 ATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGT 23984 || || || ||||| || | | || || || ||||| |||| Sbjct 92525 GTACTTGAAATCACGGTCATAGATGATAGCAGAGTTCAAGCGGT 92482 Score = 120 bits (132), Expect = 3e-22 Identities = 400/620 (65%), Gaps = 2/620 (0%) Strand=Plus/Plus Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| |||||||| || | ||||| | |||||| ||||| ||||||| ||||| Sbjct 132920 TCATGAAAAGATCAGGCACCCATAATCCCAAGAACAAGTCGCGTGCGCGCATTTCCTCAG 132979 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 || ||||||| ||| ||||| || || || ||||| ||||||| || || | || Sbjct 132980 CACCATTGTTCTTGCGCAAGTCCAAGAATTCGAATACGTCGACATGCCAAGGTTCTATGT 133039 Query 23472 AAACGGCAAACGCGCCCGGT-CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 | || ||||| | ||| | | ||| || || || || | || || |||| Sbjct 133040 AGACAGCAAA-GTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCGAGCAGTGTCA 133098 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTC 23590 || | ||||| ||||| || | || || ||||| | ||| | || || | | Sbjct 133099 TTAAAGACTCTGAGCATTGGAATGATGCCATTGGAGGTACCGTTTGTTCCTGCGATATAA 133158 Query 23591 GAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATC 23650 || || | |||| || ||| | | || | || || | || || || || Sbjct 133159 GAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGACTTTGAGATA 133218 Query 23651 ATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACC 23710 || || | | ||| ||||||||||| ||||| ||||||||||| | || Sbjct 133219 CGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTTTCATTTGAACA 133278 Query 23711 AAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCG 23770 | ||| || ||||| ||| | ||| || ||| | || ||||| ||| || | || Sbjct 133279 AGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGTAGGTGTAGCA 133338 Query 23771 TGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCT 23830 || ||||||||| | ||||| |||| || || || |||| || | ||| | Sbjct 133339 TGAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAGGCGCTTTCTAGGTCGTTA 133398 Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCG 23890 ||||| || || || || || ||||| |||||||||||||||| || || | | Sbjct 133399 CCGTGAATGCCAATAGCAACACGCATGATCATGTATTGAGGTCGTTCAACGATTTTGTTA 133458 Query 23891 TTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAG 23950 ||||| || | || || ||||| | ||| ||||| ||||| ||| | | | ||| Sbjct 133459 TTAATCTTTAGCAAGTAGCTACGTTCTAACGTCTTAAAGCCAAAGAAGTTAAAATCAAAA 133518 Query 23951 TCACGATCGTGCACTATGGC 23970 || | ||| || | ||||| Sbjct 133519 TCTCTATCATGGATGATGGC 133538 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22153 ATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTT 22212 |||||||||||| ||||| || ||| ||||||| || ||||| || || || |||| ||| Sbjct 131511 ATAATACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAGTTT 131570 Query 22213 TCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCC 22272 ||| | | || | | | ||| ||| | || ||| || || ||||| ||||| Sbjct 131571 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGGCTCC 131630 Query 22273 TCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAG 22332 || || |||||||| | || | || | || || |||||||| |||||||| || Sbjct 131631 TCTGTCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTCTTGTATAG 131690 >seq80 Length=87281 Score = 161 bits (178), Expect = 9e-35 Identities = 466/710 (66%), Gaps = 13/710 (2%) Strand=Plus/Minus Query 57689 CGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATT 57748 ||| ||||| || || || | || ||||| |||||||| || || ||||| ||| || Sbjct 44979 CGTTTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTT 44920 Query 57749 TTCACAAGAAGTGCAAG-TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTG 57807 || | ||||| |||| | | || || | ||| || || || |||||| | |||| Sbjct 44919 TTGTGATGAAGT-CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTG 44861 Query 57808 AAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACG 57867 |||| | || |||||| || || | || || || || | || |||||| | | Sbjct 44860 AAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGACAACCAAG 44801 Query 57868 AGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGT 57927 ||||| | || || || || || || || || ||| | ||||| || | Sbjct 44800 AGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATT 44741 Query 57928 GGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCG 57987 || | |||||||||| | | | | | || || || | || | || || | Sbjct 44740 GGGCCTTCAAATGGATTTC---CTCTAACGGTTCTTTTGCTGAACGTCTTGTTGCCTTTG 44684 Query 57988 CCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAAC 58047 | || ||||||||||| ||||| || || |||||| | || |||||| | || |||| Sbjct 44683 CTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAAAAAC 44624 Query 58048 GCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCC 58107 | || ||||||||||| |||| || ||||| || ||||| | || || || ||||| | Sbjct 44623 GTGGTCTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTC 44564 Query 58108 ATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTC--AATAAACCGACGCGGGATCG 58165 ||||||| ||||| || || | || | | ||| || || || | | || || Sbjct 44563 ATACTGACTTTGCTTGTCT--TTTATTTACCCATCTTCGTAAGCGTCCTAGCCAAGAACG 44506 Query 58166 CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCT 58225 | || ||| || ||| || || ||| || ||| | || ||| | || || || || Sbjct 44505 CGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCT 44446 Query 58226 ACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGC 58285 || || || | |||| |||||| || ||||||| ||||||| || || ||||| Sbjct 44445 TCCCGTCGCTCTCATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCGTTGC 44386 Query 58286 CGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTT 58343 || | || || | | || |||| || | | ||||| | | ||||| ||| Sbjct 44385 TGATCGTCTCATGGTTGCTCTTGGATTCGACAAGAT--TTACATGGCTACCAATCCATTT 44328 Query 58344 GATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || |||||| | ||||||| || | |||||||| ||||| || ||||| Sbjct 44327 GACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAA 44278 >seq10 Length=205532 Score = 127 bits (140), Expect = 2e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||| |||||||||||||| || ||||| ||||| || | || || ||| | Sbjct 110216 AAAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAATC 110275 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || || ||| |||||| ||||| || | || ||||||||||| | || || || Sbjct 110276 TTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCTGA 110335 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| ||| | || || || ||||| ||||| | || || | ||| |||| || || Sbjct 110336 CCAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGACTA 110395 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| ||||| || ||||| |||| ||| | || | || |||| Sbjct 110396 CAACATCCAAAAGGAATCTACCCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 110448 >seq57 Length=110979 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || || || ||||| || | || || || | || Sbjct 11441 CATGCAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTC 11382 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || ||||| | ||| ||||||||||| | || || || || Sbjct 11381 TGACACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCA 11322 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| | ||||| | || | ||||| ||||| Sbjct 11321 ACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAA 11262 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| ||||| ||||||||| |||| ||| | || | || |||| Sbjct 11261 CATCCAAAAGGAATCTACTCTTCATTTGGTCCTTCGTCTCCGTGGTGGTA 11212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763084612400