Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq80 132 1e-25 >seq80 Length=87281 Score = 132 bits (146), Expect = 1e-25 Identities = 306/459 (67%), Gaps = 3/459 (1%) Strand=Plus/Minus Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961 ||| || |||| |||||||||||||||| || ||||| |||||||| |||| | || Sbjct 44709 TTTTGCTGAACGTCTTGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTT 44650 Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 || ||||| || ||| |||| || | ||| | |||| ||| | || | | |||||| Sbjct 44649 TGCTTCCATCTTTTGGCTCAAAAAACGTGGTCTGATGCCCGGTTTGACATTCAGCAATGA 44590 Query 102022 GTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGG 102081 || || | | | || |||||||||||| |||||||| || | | || | | Sbjct 44589 ATTGATCTGTCGTGATGAAGGTCTTCATACTGACTTTGCTTGTCTTTTATTTACCCA--T 44532 Query 102082 TTTTGTTGATACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAAT 102141 || || || | | | |||| | | || || || ||||| ||| | || Sbjct 44531 CTTCGTAAGCGTCCTAGCCA-AGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCAT 44473 Query 102142 TGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTT 102201 ||||||||||||| | || | | | || || || | | || ||||||| || Sbjct 44472 TGAACAAGAATTTTTGACGGATGCTCTTCCCGTCGCTCTCATCGGCATGAACTCTGCCTT 44413 Query 102202 GATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAA 102261 |||| | |||||||| ||||| || || ||| || |||||| | ||| | || || Sbjct 44412 GATGTGTCAGTACATCGAATTCGTTGCTGATCGTCTCATGGTTGCTCTTGGATTCGACAA 44353 Query 102262 GCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGAC 102321 | || | | |||||| || || || ||||||| || || || | ||||| Sbjct 44352 GATTTACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGAC 44293 Query 102322 CAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGC 102360 |||||| ||||||||| | ||| | || ||||||||||| Sbjct 44292 CAACTTCTTTGAAAAGCGTGTCTCTGATTATCAACGTGC 44254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576455968225