Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq15 486 2e-132 seq80 257 2e-63 >seq15 Length=177086 Score = 486 bits (538), Expect = 2e-132 Identities = 1375/2097 (66%), Gaps = 34/2097 (2%) Strand=Plus/Minus Query 62076 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 62135 ||||| || || ||||| || || |||| || ||| || ||||| |||||||| Sbjct 94318 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTG 94259 Query 62136 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 62195 || || || | | | || || || ||| ||| |||| | ||||||||| || || Sbjct 94258 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 94199 Query 62196 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTT 62255 | || || | || |||||||| | ||||| || ||| | |||||||| | || Sbjct 94198 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTC 94139 Query 62256 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 62312 || || | || | || | | ||| | | | | |||||||| ||||| || || Sbjct 94138 TTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCA 94079 Query 62313 ACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 62372 |||| ||| ||||||| | || |||||||| | | || || | | | ||| Sbjct 94078 GCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGT 94019 Query 62373 AGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 62432 | || || || | ||| |||| || || | || | || ||||||| || Sbjct 94018 AACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGAT 93959 Query 62433 GTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 62492 || || ||||| | | ||||| || | ||||||| ||| || ||||| |||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 62493 GGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTT 62550 || || |||| | | || | | ||| ||| | | || || || || || Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACC--ATGCTTGGCAATCTTTTCCTTGAGTGCGG 93841 Query 62551 CCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTAC 62610 |||| | |||||||| | ||| ||| ||||| || ||||| || Sbjct 93840 CCCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTT-- 93783 Query 62611 TGGCGTAC---GAT-CCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAA 62666 | ||| | | ||| |||| || || || ||||| | ||| ||||| | | ||| Sbjct 93782 --GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 93725 Query 62667 CTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGAT-CTTGTGC 62725 || || || ||| | | || |||||||||||||| | | || | | |||| || Sbjct 93724 GAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 93666 Query 62726 TTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACC 62785 ||| || ||| ||||||||| | | || || | ||| ||||| ||||||||||| Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 62786 AATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATT 62845 | ||| || |||||||||||||| || || |||| ||||| | |||||| ||||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATT 93546 Query 62846 AATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAG 62905 ||||| || || || || | ||||| || || ||| ||||| | |||||| | Sbjct 93545 GATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 93486 Query 62906 AAAATCAAA---TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACA 62962 |||||| | | | || || ||| | | | |||| || |||| ||||| Sbjct 93485 GAAATCATACTTTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACA 93426 Query 62963 CACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 63022 || || || |||| || | | |||| | || || || || || || || ||||| Sbjct 93425 GACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTT 93366 Query 63023 GATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 63082 ||| || || || ||||| |||||||||||| ||||||| ||||||||||| || ||||| Sbjct 93365 GATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAA 93306 Query 63083 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 63142 |||| ||||||| || | || | || | ||| || | ||| | | ||||||| || Sbjct 93305 TGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGAT 93246 Query 63143 TATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCC 63202 | | | | ||| | ||| | ||||||| ||| | | || ||||| || Sbjct 93245 TGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCACC 93186 Query 63203 CCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 63262 ||| || | | |||| |||| ||||| || || | | ||||| || || | || Sbjct 93185 CCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCGTC 93126 Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTTGTTC 63321 | || || | ||| || |||||||||| ||| ||||| ||| || ||||| | | || Sbjct 93125 TCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACGAGCTC 93067 Query 63322 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63381 | ||| || || || || ||| | || | || | | ||| || | ||||| Sbjct 93066 TGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCC 93007 Query 63382 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63441 | ||||||||||| || || | | || || || || || || || ||||| | || | Sbjct 93006 AGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAAC 92947 Query 63442 TAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCGTTTGATATACCATTGGTA 63500 ||| || || || |||| | | ||| || |||||| ||||| || ||| ||||| Sbjct 92946 GAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGTTGGTG 92888 Query 63501 CCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCC 63560 |||| || || |||||| |||||||| || ||| | || || || ||||| Sbjct 92887 CCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTGCT 92828 Query 63561 ATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCG 63620 | || |||||| || || ||| | ||| |||||||| ||||| || ||| || Sbjct 92827 GTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCC 92768 Query 63621 ATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAG 63680 ||||| | || | ||||| |||||||||| |||||| || || ||||||||||| Sbjct 92767 TTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATAAA 92708 Query 63681 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAG 63740 |||||| |||||| ||||| || ||||||| | | ||||| ||||||||||||| Sbjct 92707 GTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTGCA 92648 Query 63741 TCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63800 || ||||| | ||| || || | || |||||||| | || || ||||| | |||| Sbjct 92647 TCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTTCA 92588 Query 63801 ACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63860 |||| ||| || || || | | ||| || || | ||||| |||||||| || Sbjct 92587 GCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAGAAG 92528 Query 63861 TTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATT---GAGCTTATCCTTATATT 63915 ||||| ||||| || || || || || ||| | || || | | | | | |||| Sbjct 92527 TTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTTATCCA 92470 Query 63916 TGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 63975 || ||| | | | || | | || || || || || ||||| || | || |||| Sbjct 92469 TGACGACTTTGTAC---GTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGGGAT 92413 Query 63976 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 64035 | ||||| ||| | || || || || |||| | ||| | ||||| ||||||||||| | Sbjct 92412 TCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTGAA 92353 Query 64036 GATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG 64095 |||| || ||||| || | || || | | |||||||| ||||| | || || | Sbjct 92352 GATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCATAT 92293 Query 64096 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATA 64152 || ||| |||| || || || | || | ||| || ||||| || || | |||| Sbjct 92292 AAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTATA 92236 Score = 114 bits (126), Expect = 2e-20 Identities = 279/421 (66%), Gaps = 5/421 (1%) Strand=Plus/Plus Query 62084 ATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTT 62143 ||| ||||| || || ||||| || |||| | ||||| |||||| || ||||| Sbjct 131511 ATAATACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAGGTCAGTTT 131570 Query 62144 GGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCC 62203 | | | | || || || || | ||||||||||||| ||| || || |||||||| Sbjct 131571 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGGCTCC 131630 Query 62204 CCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAAC 62263 ||||| || ||||| | || || || |||||| ||| ||||| | || || || | Sbjct 131631 TCTGTCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCATACTGTCTTGTATAG 131690 Query 62264 TCGCTTAATATCTTCTGGAAGGTTTGTATTCTGAATGGAT----CCACCATCTACCATAA 62319 || | ||| || |||| | | | | | ||||| ||||||| | || | Sbjct 131691 CTTTTTGAGATCATCAGGAATGCCAGGAATACG-TTGGATACTACCACCATGAGCGATCA 131749 Query 62320 TCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCG 62379 || | |||||||| | |||||||||||| || | | | | || | |||| Sbjct 131750 TCATGTTCTTGATGTTATCATTCCATAAACCGAGTTCAATGAGGTCATTCAGTAAATGCT 131809 Query 62380 GGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACG 62439 |||| |||| ||||||||| ||| || | || || |||||||| || || || | Sbjct 131810 GGTTGACTATTTGGAATTCACCACTTTGAACACGACGCGTATAAATATTGCTAGTGTAAG 131869 Query 62440 GTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCA 62499 | || | | || ||||| ||||| |||||| ||| ||||| |||||||| || | Sbjct 131870 GCTCAAAGCATTCGTTATTGCCCAATATTTGACTAGTGCTAGCAGTAGGCATAGGAGCAA 131929 Query 62500 C 62500 | Sbjct 131930 C 131930 >seq80 Length=87281 Score = 257 bits (284), Expect = 2e-63 Identities = 571/848 (67%), Gaps = 13/848 (2%) Strand=Plus/Plus Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 ||| || ||||| ||||||||| | ||||||| || | ||||| | || || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 | ||| || |||||||| || || ||||| || | ||||| || ||||| Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532 || |||||||| | || | |||||||||||||||| || || | || ||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 33533 TCTAACGGTTTCTTCACTCGGTGGATGTAATAA-ATGTTTAAACATCAAACATGCGAAAT 33591 | ||| ||||| || || | | || || ||| |||| | | ||| || || | Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCT-TACGAAGATGGGTAAATAAAAGACAAGCAAAGT 44557 Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651 | || ||||| || || | || || ||||| || || || | |||||||| | Sbjct 44558 CAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCA 44617 Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTA 33711 | ||||| ||||| |||||||| |||||||| || || || || |||||||| ||||| | Sbjct 44618 GACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGA 44677 Query 33712 CTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGA- 33770 | ||||||||||||| ||| | || || || || | ||||| ||||| Sbjct 44678 CAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGAGGAAATCCA--TTTGAA 44735 Query 33771 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 33829 |||||||| ||||| | || | |||||| || || || || ||| |||||| | Sbjct 44736 GGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 44795 Query 33830 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 33889 ||| || | | ||||| | |||||| || ||||||||||| || |||| | ||||| Sbjct 44796 TTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 44855 Query 33890 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 33949 |||||||| || ||||| || ||||||||| |||| || | ||||| ||||| Sbjct 44856 ATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATC 44915 Query 33950 ACAAAATCGTTCTG--CTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 |||||| ||| || | || |||||||| || || ||||| | ||||| || ||| Sbjct 44916 ACAAAA--GTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCC 44973 Query 34008 AATACATGTTTTATAAAATATTTTTCGTCT--GGTGTTAGT-TTATTCCAATCATTGATA 34064 || || | ||||| | ||||| | ||| | | || | |||||||| | Sbjct 44974 AAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGG 45033 Query 34065 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 34124 || || | ||| | |||||| |||||||||| || || || || || ||||| | Sbjct 45034 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAAT 45093 Query 34125 TTCCAGAT 34132 | |||||| Sbjct 45094 TGCCAGAT 45101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812915731600