Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq80 190 2e-43 seq15 145 7e-30 >seq80 Length=87281 Score = 190 bits (210), Expect = 2e-43 Identities = 486/728 (67%), Gaps = 19/728 (3%) Strand=Plus/Plus Query 11464 ATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCAC 11523 ||| || |||||||| || |||||| |||| || | | ||||| || || ||| | || Sbjct 44382 ATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGAC 44441 Query 11524 CGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGT 11583 |||| |||| | |||||||| || | ||| || | || || || | ||| || | | Sbjct 44442 GGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATCCTT 44501 Query 11584 TATAACTTCCTTAGAT-GGTGGATGTAATAA-ATGTTTAAACATTAAACACGCAAAATCA 11641 | ||| || | | || | | || || ||| |||| | | ||| ||||| ||| Sbjct 44502 GACGCGTTC-TTGGCTAGGACGCT-TACGAAGATGGGTAAATAAAAGACAAGCAAAGTCA 44559 Query 11642 CAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAAT 11701 ||| | |||||| || | || || | |||||| ||||| || |||||||||| Sbjct 44560 GTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGA 44619 Query 11702 CCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACA 11761 || |||||||| | |||||| || | |||||| |||||||| ||||| || || || ||| Sbjct 44620 CCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACA 44679 Query 11762 GCTGCAAATGCTACTACTCTTTCTCCATAT--ACCTTGTTGCTAGATATCCATTTTCTGG 11819 || ||||| || || | | ||| || | ||| ||| || |||||||| || Sbjct 44680 GCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACC--GTTAGAGGAAATCCATTTGAAGG 44737 Query 11820 CCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAAATGCATTT 11879 |||||||||| || | || | || || || || ||||| ||| | |||||| Sbjct 44738 CCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGA---GCATTT 44794 Query 11880 -TTTCTATA--TTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAA 11936 ||||| | || ||| | | ||| || || || || | ||| || |||||| |||| Sbjct 44795 CTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAA 44854 Query 11937 TATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCA 11996 ||||||| || |||||||| |||||||||||| || || | | || || || Sbjct 44855 TATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCAT 44914 Query 11997 CATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTA 12056 || |||| ||| | || || ||||| ||||| ||||| | ||||| || || | Sbjct 44915 CACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCA 44974 Query 12057 GTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT----TTATCCCAATCATCTAAA 12112 | | |||||| | ||||| ||| | | || || |||||||||| | Sbjct 44975 AAACGCGAGAGATAAAGAAACGTTCGT-TTTCGGTCATCTTGTTTTCCCAATCATGAAGG 45033 Query 12113 TCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATT 12172 || || ||||| | ||||||| | |||||||| || | | || ||||| | | Sbjct 45034 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAAT 45093 Query 12173 TTCCAGAT 12180 | |||||| Sbjct 45094 TGCCAGAT 45101 >seq15 Length=177086 Score = 145 bits (160), Expect = 7e-30 Identities = 1079/1729 (62%), Gaps = 22/1729 (1%) Strand=Plus/Minus Query 36835 TAATACATTCCAGTTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTT 36894 |||||||| || || |||| ||| | ||| || ||||| ||||||||||| || || Sbjct 94309 TAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTGGTGAGCTTA 94250 Query 36895 GCGTATGTAGGATTATCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCT 36954 | | | || | | | ||| | || ||| ||||||||| || ||| ||||||| Sbjct 94249 CCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATACGCACCA 94190 Query 36955 CTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATT 37014 | || || ||||| || | ||| |||||| || ||||| || || || || | Sbjct 94189 CGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTCTTGTAGAGG 94130 Query 37015 TGTTTTATATTATCTGGTAAA-TCTAAATGTT--GAATAGAACCATTATGTAACACA--A 37069 | ||| | || | || | | | ||| ||||||| || | || | || | Sbjct 94129 TCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCC--TCCGTCAGCCATGA 94072 Query 37070 TTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTG 37129 | ||||||| | || | |||||| | | || | ||| || | | || | Sbjct 94071 TCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGTAACCAAG 94012 Query 37130 GATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATG 37189 |||| || | ||| | || || || | || | | || || | ||| || || | Sbjct 94011 GATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGATGTGTAAG 93952 Query 37190 GTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTA 37249 |||||| | ||||| || | |||||||| || || ||||||||||| || || | Sbjct 93951 GTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGCAA 93892 Query 37250 TTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCC 37309 || || || | | ||||| | ||| | | || ||| | ||| |||| Sbjct 93891 CCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGCCCAGTCCC 93832 Query 37310 ATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367 | | || || || | | || |||||| || ||||| || ||||| || | || Sbjct 93831 AAAGATTGGTAGGTGTGACATT--CCACATGTCGTATTGCAGGATACCCTTGGATACAGG 93774 Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAG 37427 | | ||| || || || ||||| || ||| ||| | |||||| | ||| | Sbjct 93773 GCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAAGAGGCTTCCAA 93714 Query 37428 TGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATC 37487 || |||| || || ||||| || ||||| || || || || |||||| ||| Sbjct 93713 GGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTCTGGTGAATC 93654 Query 37488 GAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGG 37547 ||||| ||| | | || || || || ||||| |||||||| | ||| || || Sbjct 93653 GAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACCTAAACCAATCGG 93594 Query 37548 TCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTAT 37607 ||||||| |||| || ||||| | ||| || || ||||| ||||||||||| || || Sbjct 93593 TCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATTGATATCAATGAT 93534 Query 37608 TTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCT-CAACTTGTCGAA--CATA-A 37663 || || | ||| || | | || |||| || | || || | ||| |||| Sbjct 93533 CTTGTTCAAGTTTCTAGTGATAACCTTGGTAA-CATCGTGCAGTTTTTGGAAATCATACT 93475 Query 37664 ATACGTTATTATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTT 37723 | | |||| | ||| | || | | ||| || | | ||||| ||||| |||| Sbjct 93474 TTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACAGACAGCGACTT 93415 Query 37724 CATC--TTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCC 37781 |||| | | | | ||| | ||| |||||||| || || || | | || || || Sbjct 93414 CATCAGGACTTGAGT--ATTCAACAATTTCTGTACACAGGTTGCTGCACTTGATCGTACC 93357 Query 37782 CAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCC 37841 ||| || ||||| ||| | ||||||| ||| ||||| ||||| | || | || Sbjct 93356 CAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAATGGATTACC 93297 Query 37842 TTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTT 37901 || |||| ||||| | ||| | | ||| | || || || | | || | Sbjct 93296 AGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGATTGTTTCTCT 93237 Query 37902 AAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATC 37961 | | || | |||||||| | ||| | ||| || | ||||| || || Sbjct 93236 AGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCACCCCAGACTTC 93177 Query 37962 GCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCG 38021 |||||| ||| ||| || || | ||||||||| || || | | | || || Sbjct 93176 ATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCGTCTCTGACACG 93117 Query 38022 TTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTC 38081 | ||| || | |||||| ||||| | ||| || | ||| | ||| ||| || Sbjct 93116 CTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCACGAGCTCTGATTTCGTC 93057 Query 38082 GTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTAT 38141 || || | || |||| ||| || ||| ||| || || || ||||| ||||| | Sbjct 93056 TTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAA 92997 Query 38142 ATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTT 38201 || || | | ||| || || | |||| ||| || |||| | ||| | | | || || Sbjct 92996 GTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATT 92937 Query 38202 ATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATA 38261 || | | | | ||| || | || || || || | ||||| | |||| || || Sbjct 92936 GTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTA 92877 Query 38262 AGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGT-TTTGATA 38320 | || |||| || || || || ||| || || || ||||| ||| || || | Sbjct 92876 TGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTGC-TGTCTTGGAGA 92818 Query 38321 TTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTA 38380 || ||| || ||| | ||| ||| | |||||||| || || ||||| || | | Sbjct 92817 TTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGA 92758 Query 38381 GTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATG 38440 | | |||||| ||||||||| || || || || || |||||||| |||||| | Sbjct 92757 GCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATAAAGTAGGACTAG 92698 Query 38441 CATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCAC 38500 | ||| | || || |||| |||| | || ||||| || || | |||| ||||| Sbjct 92697 CGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGG 92638 Query 38501 CGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || || ||||| | | || | ||| | || |||||| || | ||| Sbjct 92637 TTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTTC 92589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468521315346800