Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq80 107 1e-18 >seq80 Length=87281 Score = 107 bits (118), Expect = 1e-18 Identities = 368/558 (66%), Gaps = 27/558 (5%) Strand=Plus/Minus Query 22348 TACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGATCTTAGTACTGATGTA 22407 || ||||| || | || || |||||||| | ||| || | ||| | || | || | Sbjct 45089 TATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTGAGCAAGGACCTT 45030 Query 22408 CGCCATTGGACAGAAAAACTGACCGAGGCTGAGCGCAGGTTCATGTCTCACATACTGGCA 22467 | ||||| | | || ||||||| || || || || |||| | | |||| Sbjct 45029 CATGATTGGGAAAACAAGATGACCGAAAACGAACGTTTCTTTATCTCTCGCGTTTTGGCC 44970 Query 22468 TTCTTTGCAATGG--CAGATGGCATTGTAGGCGACAACCTTGTGTGCAA---TTTCGCAA 22522 |||||||| ||| ||||||||||||| || ||| ||| || ||| ||| | | Sbjct 44969 TTCTTTGC--TGGTTCAGATGGCATTGTTAATGAAAAC-TTG-GTTCAAAACTTTTGTGA 44914 Query 22523 AAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGTTTCAGGTGGCAATGGAAA 22582 ||| | | | ||||| ||||| | | ||||||||| ||||| | || |||| Sbjct 44913 T-GAAGT---CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAA 44858 Query 22583 ATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAGTAGCTAAAGAGAATCAAG 22642 |||| || || |||| || | || ||||| ||| ||| || | ||||| || |||| Sbjct 44857 ATATTCACGCAGAAACTTACAGTCTTTTGATTGACAC-TTA-TATC-AAAGACAACCAAG 44801 Query 22643 CC---GCATTG---TTTTCAGCAGCTGAAGATATGCCATGTGTTAAAGCCAAGGCACAGT 22696 | | || ||||| || ||| ||| || ||| | || ||||| | | Sbjct 44800 AGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATT 44741 Query 22697 GGGC-TGCACAATGGCTGAATGCCACACATAAGTCTATCGCAACACGTCTCTTGGCCTTT 22755 |||| | || ||||| | | || | | ||| | || |||||| | |||||| Sbjct 44740 GGGCCTTCA-AATGGAT---TTCCTCTAACGGTTCTTTTGCTGAACGTCTTGTTGCCTTT 44685 Query 22756 GCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAA 22815 || ||||| ||||| || | || ||||| || ||||| |||| || ||||| || ||| Sbjct 44684 GCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAAAAA 44625 Query 22816 CGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTA 22875 ||| || ||||| || ||| | || ||| || ||||| | ||||| |||||||| Sbjct 44624 CGTGGTCTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTT 44565 Query 22876 CACTGTGACTTTGCTTGT 22893 || ||||||||||||| Sbjct 44564 CATACTGACTTTGCTTGT 44547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231016749785