Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq15 533 2e-146 seq80 242 5e-59 >seq15 Length=177086 Score = 533 bits (590), Expect = 2e-146 Identities = 1400/2114 (66%), Gaps = 38/2114 (2%) Strand=Plus/Minus Query 78748 GTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTC 78807 ||||| || || ||||| || || |||| || ||| || || || |||||||| Sbjct 94318 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTG 94259 Query 78808 GTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATG 78867 || || || | | | || || || ||| ||| |||| | ||||||||| || || Sbjct 94258 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 94199 Query 78868 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 78927 | || || | || |||||||| | ||||| || ||| | |||||||| | || Sbjct 94198 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTC 94139 Query 78928 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 78984 || || | || | || | | ||| | | | | |||||||| ||||| || || Sbjct 94138 TTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCA 94079 Query 78985 GCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 79044 ||||| ||| ||||||| | || |||||||| | | || || | | | ||| Sbjct 94078 GCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGT 94019 Query 79045 AGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTG 79104 | ||||| || | |||| |||| || || | || | || ||||||| || Sbjct 94018 AACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGAT 93959 Query 79105 GTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATA 79164 || || ||||| | ||||||| || | ||||||| ||| || || || |||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 79165 GGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATT 79222 || || |||| | | || | | ||| ||| | | || || || || || | Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACC--ATGCTTGGCAATCTTTTCCTTGAGTGCGG 93841 Query 79223 CCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTT-- 79280 |||| |||||||||| | || |||||||| | || ||||| || ||||| || Sbjct 93840 CCCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTTGG 93781 Query 79281 --ACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAA 79338 || || | || ||| || ||||| || ||||| | |||||| || || || ||| Sbjct 93780 ATAC-AGGGC-TG--CCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 93725 Query 79339 CTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGC 79397 || || || || | | || |||||||| || || | | || | | |||| || Sbjct 93724 GAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 93666 Query 79398 TTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACC 79457 |||| | ||| ||||||||| | | || || | ||| ||||| ||||||||||| Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 79458 AATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATT 79517 | ||| || |||||||||||||| || || |||| ||||| | |||||| ||||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATT 93546 Query 79518 AATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAG 79577 ||||| || || || || | || || || || ||| ||||| | ||||| | Sbjct 93545 GATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 93486 Query 79578 AAAATCAAA---TCGTCCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACA 79634 |||||| | | || || || ||| | | | || | || |||| ||||| Sbjct 93485 GAAATCATACTTTTCTCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACA 93426 Query 79635 AACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTT 79694 || || || |||| || | | |||| | ||||| || || ||||| || ||||| Sbjct 93425 GACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTT 93366 Query 79695 AATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 79754 || || || || ||||| |||||||||||| ||||||| ||||||||||| || ||||| Sbjct 93365 GATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAA 93306 Query 79755 CGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 79814 ||| ||||||| || | || | || | ||| || | ||| | | ||||||| || Sbjct 93305 TGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGAT 93246 Query 79815 TATAGACTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCT 79872 | | | || ||||| ||| | |||||||| | ||| | | || ||||| Sbjct 93245 TGTTTC--TCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTCA 93188 Query 79873 CCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCA 79932 ||||| || || | |||||||||| ||| | || || | | ||||| || ||| | Sbjct 93187 CCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACCG 93128 Query 79933 TCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGT 79991 || | || || | ||| || |||||||||| ||| ||||| ||| || ||||| | | Sbjct 93127 TCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACGAGC 93069 Query 79992 TCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATG 80051 ||| || || || || || ||| | || | || | | ||| || | ||| Sbjct 93068 TCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCATG 93009 Query 80052 CCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTA 80111 ||| ||||||||||| || || | | ||||| || || || || || ||||| | || Sbjct 93008 CCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACATA 92949 Query 80112 TCTAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCATTGGATGTACCATTGG 80170 | ||| || || || |||| | | ||| || |||||| || ||||| ||| |||| Sbjct 92948 ACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGTTGG 92890 Query 80171 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 80230 | |||| || || |||||| |||||||| || ||| | || || || |||| Sbjct 92889 TGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCTG 92830 Query 80231 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCAT 80290 | | || |||||| || || ||| | ||| |||||||| || || || ||| | Sbjct 92829 CTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTT 92770 Query 80291 CAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 80350 | ||||| | || | ||||| |||||||||| ||||| || || |||||||||| Sbjct 92769 CCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAATA 92710 Query 80351 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTG 80410 | |||||| |||||| ||||| || ||||||||| | ||||| ||||||||||||| Sbjct 92709 AAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTG 92650 Query 80411 ATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTT 80470 || ||||| | ||| || || | ||| |||||||| | || || ||||| | || Sbjct 92649 CATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGTT 92590 Query 80471 CAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAAT 80530 || | |||||| | || || | | |||||| || | ||||| |||||||| Sbjct 92589 CAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAGA 92530 Query 80531 AGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTT---GAGTTTATCCTTATA 80585 ||||||| ||||| || || || || || ||| | ||||| | | | | | |||| Sbjct 92529 AGTTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTTATC 92472 Query 80586 TTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGG 80645 || || || | || | | || || || || || ||||| || | || || Sbjct 92471 CATG---ACGACTTTGTACGTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGGG 92415 Query 80646 ATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTG 80705 ||| ||||| ||| | || || || || |||| | ||| | ||||| ||||||||||| Sbjct 92414 ATTCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGTG 92355 Query 80706 TAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACA 80765 ||||| || | ||| || | || || || | |||||||| ||||| | || || Sbjct 92354 AAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCAT 92295 Query 80766 AGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATAT 80825 | || ||| |||| || || || | || | ||| || ||||| || || | |||| Sbjct 92294 ATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTATAC 92235 Query 80826 TCCTTGGATAACCT 80839 || |||||||| Sbjct 92234 ACCAGAGATAACCT 92221 >seq80 Length=87281 Score = 242 bits (268), Expect = 5e-59 Identities = 567/848 (67%), Gaps = 13/848 (2%) Strand=Plus/Plus Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 ||| || ||| ||||| ||||| || || || || || |||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 49790 ||| || ||||| ||||||||| | | ||||| || | ||||| | || || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 49791 TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 49850 | ||| || || ||||| || || ||||| || | ||||| || || || Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 49851 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 49910 || |||||||| | || | |||||||||||||||| || || || || ||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 49911 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 | ||| ||||| || || | | | ||| |||| | | ||| || || || Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 44558 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 || ||||| || || | || || | ||| ||| || || | |||||||| || Sbjct 44559 AGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAG 44618 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 ||||| ||||| |||||||| ||||| ||||| || ||||| |||||||| ||||| || Sbjct 44619 ACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGAC 44678 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGA-- 50148 || |||||||||||||| | || || || || | ||||| ||||| Sbjct 44679 AGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGAGGAAATCCA--TTTGAAG 44736 Query 50149 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 50208 |||||||| ||||| | || | |||||| || || || || ||| |||||| | | Sbjct 44737 GCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTCT 44796 Query 50209 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 50268 || || | | ||||| | |||||| || ||||||||||| || |||| | ||||| Sbjct 44797 TTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAATA 44856 Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTA 50328 |||||||| || ||||| || ||||||||| |||| || | ||||| ||||| | Sbjct 44857 TTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATCA 44916 Query 50329 CAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAAT 50388 ||||| || | | || |||||||| || || || || | ||||| || ||||| Sbjct 44917 CAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAAA 44976 Query 50389 ACATGTTTTATA---AAATGT---TTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATA 50442 || | ||| ||| || |||||| | | || |||| | |||||||| | Sbjct 44977 ACGCGAGAGATAAAGAAACGTTCGTTTTCGGT-CATCTT-GTTT-TCCCAATCATGAAGG 45033 Query 50443 TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 50502 || || | ||| | |||||| |||||||||| || || || || || ||||| | Sbjct 45034 TCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAAT 45093 Query 50503 TTCCAGAT 50510 | |||||| Sbjct 45094 TGCCAGAT 45101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263457875800