Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq15 508 8e-139 seq80 237 2e-57 >seq15 Length=177086 Score = 508 bits (562), Expect = 8e-139 Identities = 1394/2115 (66%), Gaps = 40/2115 (2%) Strand=Plus/Minus Query 70831 GTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTC 70890 ||||| || || ||||||||||| |||| || ||| || ||||| |||||||| Sbjct 94318 GTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTG 94259 Query 70891 GTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATG 70950 || || || | || | || || || || || |||| |||||||| || || Sbjct 94258 GTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATA 94199 Query 70951 AAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTT 71010 | || || | || |||||||| | ||||| || ||| | |||||||| | || Sbjct 94198 TACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGTC 94139 Query 71011 TTATAAAC-TCGCTTAATATCTTCTGGAAGGTTTGTA--TTCTGAATGGATCCACCATCT 71067 || || | || | || | | ||| | | | | |||||||| ||||| || || Sbjct 94138 TTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCA 94079 Query 71068 GCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGG 71127 || || ||| |||| || | || |||||||| | | || || | | | ||| Sbjct 94078 GCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAGT 94019 Query 71128 AGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 71187 | |||||| || | |||| |||| || || | || | ||| ||||||| || Sbjct 94018 AACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGAT 93959 Query 71188 GTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATA 71247 || || ||||| | | ||||| || | ||||||| ||| || ||||| |||||| Sbjct 93958 GTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATA 93899 Query 71248 GGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGG--ATTTTATCTTTTAGAGATT 71305 || || |||| ||| || | | |||||| | || || || || || || | Sbjct 93898 GGAGCAACCAGCAGAGAGTTACGGACACCATGC--TTGGCAATCTTTTCCTTGAGTGCGG 93841 Query 71306 CCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTT-- 71363 |||| | |||||||| | ||| || || || || Sbjct 93840 CCCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTTGG 93781 Query 71364 --ACTAGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAA 71421 || || | || ||| |||| || ||||| ||||| | ||||| || | || ||| Sbjct 93780 ATAC-AGGGC-TG--CCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAA 93725 Query 71422 CTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGC 71480 || || || || ||| || |||||||| || || | | || | | |||| || Sbjct 93724 GAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GC 93666 Query 71481 TTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCC 71540 ||| || ||| ||||||||| | | || || | ||| ||||| |||||||| || Sbjct 93665 TTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACC 93606 Query 71541 AATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATT 71600 | ||| || ||||| |||||||| || || |||| ||||| | |||||| ||||| Sbjct 93605 TAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATT 93546 Query 71601 AATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAG 71660 ||||| || || || || | ||||| || || ||| ||||| | ||||| | Sbjct 93545 GATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTG 93486 Query 71661 AAAATCAAATCTCCCATCTATTA--CAAACACGTTCA-AG-GCAACAGATGCCAGATTAC 71716 |||||| | | | |||||| || | | || || |||| || |||| |||| Sbjct 93485 GAAATCATACTTTTC-TCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTAC 93427 Query 71717 AAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACT 71776 | || || || |||| || | | |||| | |||||| || || || || || |||| Sbjct 93426 AGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACT 93367 Query 71777 TGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAA 71836 |||| || || || ||||| |||||||||||| ||||||| ||||||||||| || || | Sbjct 93366 TGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGA 93307 Query 71837 ACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA 71896 | ||| ||||||| || | || | || | ||| || | ||| | | ||||||| | Sbjct 93306 ATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGAGCCTTGA 93247 Query 71897 TTATATTCTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 71954 || | |||| || ||||| ||| | |||||||| | ||| | | || ||||| Sbjct 93246 TTGT-TTCTC-TAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAATTCGTC 93189 Query 71955 TCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATC 72014 ||||| | | | |||||||||| |||||| || || | | ||||| || ||| | Sbjct 93188 ACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCACCACC 93129 Query 72015 ATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGG 72073 || | || || | ||| || |||||||||| ||| ||||| ||| || ||||| | | Sbjct 93128 GTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGC-ATAGAACAGATCACGAG 93070 Query 72074 TTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 72133 ||| || || || || || ||| | || | || | | ||| || | || Sbjct 93069 CTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCTGCAT 93010 Query 72134 GCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGT 72193 |||| ||||||||||| || || | | ||||| || || || || || ||||| | | Sbjct 93009 GCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCGACAT 92950 Query 72194 ATCTAGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCATTGGATGCACCATTG 72252 | | ||| || || || |||| | | ||| || |||||| || ||||| ||| ||| Sbjct 92949 AACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACCGTTG 92891 Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCT 72312 || |||| || || |||||| |||||||| ||| ||| | || || || ||| Sbjct 92890 GTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCGCCT 92831 Query 72313 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 72372 || | || |||||| || || ||| | ||| |||||||| || || || ||| Sbjct 92830 GCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCT 92771 Query 72373 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 72432 ||| ||||| | || | ||||| |||||||||| ||||| || || ||||||||| Sbjct 92770 TCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATTAAAT 92711 Query 72433 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 72492 || |||||| |||||| ||||| || ||||||||| | ||||| |||||||||||| Sbjct 92710 AAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCT 92651 Query 72493 GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTT 72552 | || ||||| | ||| || || | ||| |||||||| | || ||| ||||| | | Sbjct 92650 GCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGGACGT 92591 Query 72553 TCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 72612 ||| | |||||| | || || | | ||| || || | ||||| |||||||| Sbjct 92590 TCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACCAAAG 92531 Query 72613 TAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATT---GAGTTTATCCTTAT 72667 ||||||| ||||| || || || || || ||| | || || | | | | | |||| Sbjct 92530 AAGTTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCGTTAT 92473 Query 72668 ATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAG 72727 || ||| | | | || | | || || || || || ||||| || | || | Sbjct 92472 CCATGACGACTTTGTAC---GTTTCATTAGAGATCATGGGTGAGTGTTTGCCTGTCTTGG 92416 Query 72728 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 72787 |||| ||||| ||| | || || || || |||| | ||| | ||||| |||||||||| Sbjct 92415 GATTCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCCTTGT 92356 Query 72788 GTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTAC 72847 | ||||| || | ||| || | || || | | |||||||| ||||| | || || Sbjct 92355 GAAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTGGTCA 92296 Query 72848 AAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATA 72907 | || ||| ||||||| || || | || | ||| || ||||| || || | |||| Sbjct 92295 TATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGGTATA 92236 Query 72908 TTCCTTGGATAACCT 72922 || |||||||| Sbjct 92235 CACCAGAGATAACCT 92221 >seq80 Length=87281 Score = 237 bits (262), Expect = 2e-57 Identities = 567/849 (67%), Gaps = 15/849 (2%) Strand=Plus/Plus Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 ||| || ||| ||||| ||||| || || || ||||| |||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 41895 ||| || ||||| ||||||||| | | ||||| || | ||||| | || || | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 41896 TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 41955 | ||| || | |||||| || || ||||| || | ||||| || || || Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 41956 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 42015 || |||||||| | || | ||||||||||||||| ||| || || || ||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 42016 TCTTACTGTTTCTTCACTCGGTGGAT-ACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 | || ||||| || || | | || | | ||| |||| | | ||| || || | Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAAGT 44557 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | || ||||| ||||| | || || ||||| ||| || || | |||||||| | Sbjct 44558 CAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCA 44617 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | ||||| ||||| |||||||| || || ||||| || ||||| |||||||| ||||| | Sbjct 44618 GACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGA 44677 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTTTT 42251 | || |||||||||| ||| | || || || | || || | ||||| ||| Sbjct 44678 CAGCAGCAAAGGCAACAAGACGTTCAGCAAAA---GAACCGTTAGAGGAAATCCA--TTT 44732 Query 42252 GA--GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 || |||||||| ||||| | || | |||||| || || || || ||| |||||| Sbjct 44733 GAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCAT 44792 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | ||| || | | ||||| | ||| || || ||||||||||| || |||||| || Sbjct 44793 TTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTG 44852 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429 ||| |||||||| || ||||| || ||||||||| | || || | || || ||||| Sbjct 44853 AATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTC 44912 Query 42430 TGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGC 42489 |||||| || | | || ||||| || || || || || | ||||| || || Sbjct 44913 ATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGC 44972 Query 42490 CAATACATGTTTTATAAAATATTTTTCG--TCCGGTGTTAAT-TTATTCCAATCATTGAT 42546 ||| || | ||||| | |||| | |||| | | || | |||||||| | Sbjct 44973 CAAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAG 45032 Query 42547 ATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606 || || | ||| | |||||| | |||||||| || ||||| || || ||||| | Sbjct 45033 GTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATAGAA 45092 Query 42607 ATTCCAGAT 42615 | |||||| Sbjct 45093 TTGCCAGAT 45101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134208402200